SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001083600
Gene Symbol: NAA60

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr16:g.3483456A>G COSM970453 TCGA-AP-A056-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-5008-3p accaacAGCACAGca CCUGUGCU m7b Created HPCB3_8211_G11295.1_3533458
hsa-miR-6737-3p accaacAGCACAGca UCUGUGCU m7b Created HPCB3_8211_G11295.1_3533458
hsa-miR-7157-3p accaacAGCACAGca UCUGUGCU m7b Created HPCB3_8211_G11295.1_3533458

Mutation Mutation ID Sample Name Cancer Type
chr16:g.3483449A>G COSM1216651 587342 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-7855-5p cCTCACCAccaacaa UUGGUGAG m7b Disrupted HPCB3_8211_G11295.1_3533458
hsa-miR-876-3p cctcACCACCAacaa UGGUGGUU m7a Disrupted HPCB3_8211_G11295.1_3533458
hsa-miR-323a-5p cctcACCACCaacaa AGGUGGUC m6b Disrupted HPCB3_8211_G11295.1_3533458
hsa-miR-4730 cctcaCCGCCAacaa CUGGCGGA m6b Created HPCB3_8211_G11295.1_3533458
hsa-miR-6770-3p cctcaCCGCCAacaa CUGGCGGC m6b Created HPCB3_8211_G11295.1_3533458

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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