SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001083112
Gene Symbol: GPD2
Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr2:g.156569418C>T COSM3299655 Gp5D [large_intestine][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-552-5p ctgctGTTAAAactc GUUUAACC m6b Created HPCB3_12518_G17028.1_157425941
hsa-miR-514b-3p ctgcTGTCAAaactc AUUGACAC m6b Disrupted HPCB3_12518_G17028.1_157425941
hsa-miR-514a-3p ctgcTGTCAAaactc AUUGACAC m6b Disrupted HPCB3_12518_G17028.1_157425941
hsa-miR-302c-5p ctgcTGTTAAAactc UUUAACAU m7a Created HPCB3_12518_G17028.1_157425941
hsa-miR-2277-3p ctGCTGTCAaaactc UGACAGCG m7a (m7a->m6a) HPCB3_12518_G17028.1_157425941
hsa-miR-2052 ctgctgTCAAAACtc UGUUUUGA m7b Disrupted HPCB3_12518_G17028.1_157425941

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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