SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001080469
Gene Symbol: FBXO46

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr19:g.45711844C>A COSM4684019 T3021 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4446-3p cccaAGCCCTaccac CAGGGCUG m6b Disrupted HPTK1_16031_G18972.1_46215093
hsa-miR-4473 cccaAGCACTAccac CUAGUGCU m7b Created HPTK1_16031_G18972.1_46215093
hsa-miR-5088-5p cccaAGCCCTaccac CAGGGCUC m6b Disrupted HPTK1_16031_G18972.1_46215093
hsa-miR-512-3p cccaAGCACTaccac AAGUGCUG m6b Created HPTK1_16031_G18972.1_46215093
hsa-miR-520f-3p cccAAGCACTaccac AAGUGCUU m7b Created HPTK1_16031_G18972.1_46215093
hsa-miR-6073 cccaagCACTACCac GGUAGUGA m7a Created HPTK1_16031_G18972.1_46215093
hsa-miR-636 ccCAAGCACtaccac UGUGCUUG m7b (m6b->m7b) HPTK1_16031_G18972.1_46215093
hsa-miR-27a-5p cccAAGCCCTaccac AGGGCUUA m7a Disrupted HPTK1_16031_G18972.1_46215093
hsa-miR-3158-3p cccAAGCCCTaccac AAGGGCUU m7b Disrupted HPTK1_16031_G18972.1_46215093

Mutation Mutation ID Sample Name Cancer Type
chr19:g.45711820G>A COSM3535963 TCGA-FS-A1ZM-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID

No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.
*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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