SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001080448
Gene Symbol: EPHA6
Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr3:g.96987845T>C COSM3775395 TCGA-BT-A2LB-01 [urinary_tract][bladder][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3173-3p cctCCTCCTTggttg AAAGGAGG m7b Created HPCB3_15292_G20960.1_96706680
hsa-miR-583 cctCCTCTTTGgttg CAAAGAGG m8a Disrupted HPCB3_15292_G20960.1_96706680
hsa-miR-6891-5p cctCCTCCTTggttg UAAGGAGG m7b Created HPCB3_15292_G20960.1_96706680
hsa-miR-3173-3p cctCCTCCTTggttg AAAGGAGG m7b Created HPCB3_15292_G20960.1_96706680
hsa-miR-583 cctCCTCTTTGgttg CAAAGAGG m8a Disrupted HPCB3_15292_G20960.1_96706680
hsa-miR-6891-5p cctCCTCCTTggttg UAAGGAGG m7b Created HPCB3_15292_G20960.1_96706680
hsa-miR-3173-3p cctCCTCCTTggttg AAAGGAGG m7b Created HPCB3_15292_G20960.1_96706680
hsa-miR-583 cctCCTCTTTGgttg CAAAGAGG m8a Disrupted HPCB3_15292_G20960.1_96706680
hsa-miR-6891-5p cctCCTCCTTggttg UAAGGAGG m7b Created HPCB3_15292_G20960.1_96706680

Mutation Mutation ID Sample Name Cancer Type
chr3:g.96987834G>T COSM731398 TCGA-66-2787-01 [lung][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-652-5p aAGGGTTGattcctc CAACCCUA m7a Disrupted HPCB3_15292_G20960.1_96706680
hsa-miR-652-5p aAGGGTTGattcctc CAACCCUA m7a Disrupted HPCB3_15292_G20960.1_96706680
hsa-miR-652-5p aAGGGTTGattcctc CAACCCUA m7a Disrupted HPCB3_15292_G20960.1_96706680

Mutation Mutation ID Sample Name Cancer Type
chr3:g.96987831G>C COSM3598035 TCGA-EE-A3AC-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-652-5p tccaAGGGTTGattc CAACCCUA m7a Disrupted HPCB3_15292_G20960.1_96706680
hsa-miR-7109-3p tccaAGGCTTGattc CAAGCCUC m7a Created HPCB3_15292_G20960.1_96706680
hsa-miR-652-5p tccaAGGGTTGattc CAACCCUA m7a Disrupted HPCB3_15292_G20960.1_96706680
hsa-miR-7109-3p tccaAGGCTTGattc CAAGCCUC m7a Created HPCB3_15292_G20960.1_96706680
hsa-miR-652-5p tccaAGGGTTGattc CAACCCUA m7a Disrupted HPCB3_15292_G20960.1_96706680
hsa-miR-7109-3p tccaAGGCTTGattc CAAGCCUC m7a Created HPCB3_15292_G20960.1_96706680
Mutation Mutation ID Sample Name Cancer Type
chr3:g.96987818T>C COSM1425835 TCGA-CM-6167-01 [large_intestine][caecum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr3:g.96987817A>G COSM1425832 TCGA-A6-5666-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1263 tttcctGGTACCATt AUGGUACC m8a Created HPCB3_15292_G20960.1_96706680
hsa-miR-1911-3p tttCCTGGTaccatt CACCAGGC m6b Created HPCB3_15292_G20960.1_96706680
hsa-miR-5579-5p tttcctgGTACCATt UAUGGUAC m7b Created HPCB3_15292_G20960.1_96706680
hsa-miR-665 ttTCCTGGTaccatt ACCAGGAG m7a (m6a->m7a) HPCB3_15292_G20960.1_96706680
hsa-miR-6753-5p tttCCTGGTaccatt CACCAGGG m6b Created HPCB3_15292_G20960.1_96706680
hsa-miR-1263 tttcctGGTACCATt AUGGUACC m8a Created HPCB3_15292_G20960.1_96706680
hsa-miR-1911-3p tttCCTGGTaccatt CACCAGGC m6b Created HPCB3_15292_G20960.1_96706680
hsa-miR-5579-5p tttcctgGTACCATt UAUGGUAC m7b Created HPCB3_15292_G20960.1_96706680
hsa-miR-665 ttTCCTGGTaccatt ACCAGGAG m7a (m6a->m7a) HPCB3_15292_G20960.1_96706680
hsa-miR-6753-5p tttCCTGGTaccatt CACCAGGG m6b Created HPCB3_15292_G20960.1_96706680
hsa-miR-1263 tttcctGGTACCATt AUGGUACC m8a Created HPCB3_15292_G20960.1_96706680
hsa-miR-1911-3p tttCCTGGTaccatt CACCAGGC m6b Created HPCB3_15292_G20960.1_96706680
hsa-miR-5579-5p tttcctgGTACCATt UAUGGUAC m7b Created HPCB3_15292_G20960.1_96706680
hsa-miR-665 ttTCCTGGTaccatt ACCAGGAG m7a (m6a->m7a) HPCB3_15292_G20960.1_96706680
hsa-miR-6753-5p tttCCTGGTaccatt CACCAGGG m6b Created HPCB3_15292_G20960.1_96706680

Mutation Mutation ID Sample Name Cancer Type
chr3:g.96987816G>T COSM585179 TCGA-50-5066-01 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-651-3p gTTTCCTTataccat AAAGGAAA m7b Created HPCB3_15292_G20960.1_96706680
hsa-miR-873-5p gtTTCCTGataccat GCAGGAAC m6b Disrupted HPCB3_15292_G20960.1_96706680
hsa-miR-651-3p gTTTCCTTataccat AAAGGAAA m7b Created HPCB3_15292_G20960.1_96706680
hsa-miR-873-5p gtTTCCTGataccat GCAGGAAC m6b Disrupted HPCB3_15292_G20960.1_96706680
hsa-miR-651-3p gTTTCCTTataccat AAAGGAAA m7b Created HPCB3_15292_G20960.1_96706680
hsa-miR-873-5p gtTTCCTGataccat GCAGGAAC m6b Disrupted HPCB3_15292_G20960.1_96706680

Mutation Mutation ID Sample Name Cancer Type
chr3:g.96987816G>C COSM625 PD0119a [breast][NS][carcinoma][lobular_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3915 gtTTCCTCAtaccat UUGAGGAA m7b (m6b->m7b) HPCB3_15292_G20960.1_96706680
hsa-miR-3928-3p gtTTCCTCataccat GGAGGAAC m6b Created HPCB3_15292_G20960.1_96706680

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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