SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001080412
Gene Symbol: ZBTB38
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr3:g.141442781G>A COSM4618303 C135 [large_intestine][right][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-2110 aTTCCCCAggtccct UUGGGGAA m7b Created HPSLC_13119_G15532.1_141161618
hsa-miR-3649 attccccAGGTCCCt AGGGACCU m7b Created HPSLC_13119_G15532.1_141161618
hsa-miR-3661 attccCCAGGTCcct UGACCUGG m7b Created HPSLC_13119_G15532.1_141161618
hsa-miR-4532 attCCCCGGGtccct CCCCGGGG m7b Disrupted HPSLC_13119_G15532.1_141161618
hsa-miR-4667-5p atTCCCCAGgtccct ACUGGGGA m7b (m6b->m7b) HPSLC_13119_G15532.1_141161618
hsa-miR-4700-5p atTCCCCAGgtccct UCUGGGGA m7b (m6b->m7b) HPSLC_13119_G15532.1_141161618
hsa-miR-492 attcccCAGGTCCct AGGACCUG m7b Created HPSLC_13119_G15532.1_141161618
hsa-miR-631 attccCCAGGTCcct AGACCUGG m7b Created HPSLC_13119_G15532.1_141161618
hsa-miR-6852-5p attCCCCAGGtccct CCCUGGGG m7b Created HPSLC_13119_G15532.1_141161618
hsa-miR-7851-3p attcCCCAGGTccct UACCUGGG m7b Created HPSLC_13119_G15532.1_141161618
hsa-miR-8089 atTCCCCAGGtccct CCUGGGGA m8a Created HPSLC_13119_G15532.1_141161618
hsa-miR-2110 aTTCCCCAggtccct UUGGGGAA m7b Created HPSLC_13119_G15532.1_141161618
hsa-miR-3649 attccccAGGTCCCt AGGGACCU m7b Created HPSLC_13119_G15532.1_141161618
hsa-miR-3661 attccCCAGGTCcct UGACCUGG m7b Created HPSLC_13119_G15532.1_141161618
hsa-miR-4532 attCCCCGGGtccct CCCCGGGG m7b Disrupted HPSLC_13119_G15532.1_141161618
hsa-miR-4667-5p atTCCCCAGgtccct ACUGGGGA m7b (m6b->m7b) HPSLC_13119_G15532.1_141161618
hsa-miR-4700-5p atTCCCCAGgtccct UCUGGGGA m7b (m6b->m7b) HPSLC_13119_G15532.1_141161618
hsa-miR-492 attcccCAGGTCCct AGGACCUG m7b Created HPSLC_13119_G15532.1_141161618
hsa-miR-631 attccCCAGGTCcct AGACCUGG m7b Created HPSLC_13119_G15532.1_141161618
hsa-miR-6852-5p attCCCCAGGtccct CCCUGGGG m7b Created HPSLC_13119_G15532.1_141161618
hsa-miR-7851-3p attcCCCAGGTccct UACCUGGG m7b Created HPSLC_13119_G15532.1_141161618
hsa-miR-8089 atTCCCCAGGtccct CCUGGGGA m8a Created HPSLC_13119_G15532.1_141161618

Mutation Mutation ID Sample Name Cancer Type
chr3:g.141442767T>C COSM479506 TCGA-BP-4970-01 [kidney][NS][carcinoma][clear_cell_renal_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1253 tcgcaaCTTCTCaaa AGAGAAGA m6b Disrupted HPSLC_13119_G15532.1_141161618
hsa-miR-377-5p tcgCAACCTCTcaaa AGAGGUUG m8a Created HPSLC_13119_G15532.1_141161618
hsa-miR-495-5p tcGCAACTTCtcaaa GAAGUUGC m8a Disrupted HPSLC_13119_G15532.1_141161618
hsa-miR-580-3p tcgcaacTTCTCAAa UUGAGAAU m7a Disrupted HPSLC_13119_G15532.1_141161618
hsa-miR-6086 tcgCAACCTCtcaaa GGAGGUUG m7b Created HPSLC_13119_G15532.1_141161618
hsa-miR-6770-5p tcgcaaCTTCTCAaa UGAGAAGG m7a Disrupted HPSLC_13119_G15532.1_141161618

Mutation Mutation ID Sample Name Cancer Type
chr3:g.141442762G>A COSM3124636 SNU-175 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-382-5p actgatcACAACTTc GAAGUUGU m7b Created HPSLC_13119_G15532.1_141161618
hsa-miR-495-5p actgatcGCAACTTc GAAGUUGC m7b Disrupted HPSLC_13119_G15532.1_141161618
hsa-miR-8070 actgATCACAacttc AUGUGAUU m6b Created HPSLC_13119_G15532.1_141161618
hsa-miR-382-5p actgatcACAACTTc GAAGUUGU m7b Created HPSLC_13119_G15532.1_141161618
hsa-miR-495-5p actgatcGCAACTTc GAAGUUGC m7b Disrupted HPSLC_13119_G15532.1_141161618
hsa-miR-8070 actgATCACAacttc AUGUGAUU m6b Created HPSLC_13119_G15532.1_141161618

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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