SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001080412
Gene Symbol: ZBTB38
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr3:g.141444270A>C COSM4157328 PTC-7C [thyroid][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1269a gaccaaCAGTCCAGc CUGGACUG m8a Disrupted HPCB3_15456_G21206.1_141163089
hsa-miR-1269b gaccaaCAGTCCAGc CUGGACUG m8a Disrupted HPCB3_15456_G21206.1_141163089
hsa-miR-378a-3p gaccaacAGTCCAGc ACUGGACU m7b Disrupted HPCB3_15456_G21206.1_141163089
hsa-miR-378b gaccaacAGTCCAGc ACUGGACU m7b Disrupted HPCB3_15456_G21206.1_141163089
hsa-miR-378c gaccaacAGTCCAGc ACUGGACU m7b Disrupted HPCB3_15456_G21206.1_141163089
hsa-miR-378d gaccaacAGTCCAGc ACUGGACU m7b Disrupted HPCB3_15456_G21206.1_141163089
hsa-miR-378e gaccaacAGTCCAGc ACUGGACU m7b Disrupted HPCB3_15456_G21206.1_141163089
hsa-miR-378f gaccaacAGTCCAGc ACUGGACU m7b Disrupted HPCB3_15456_G21206.1_141163089
hsa-miR-378h gaccaacAGTCCAGc ACUGGACU m7b Disrupted HPCB3_15456_G21206.1_141163089
hsa-miR-378i gaccaacAGTCCAGc ACUGGACU m7b Disrupted HPCB3_15456_G21206.1_141163089
hsa-miR-422a gaccaacAGTCCAGc ACUGGACU m7b Disrupted HPCB3_15456_G21206.1_141163089
hsa-miR-4515 gaccaaCAGTCCagc AGGACUGG m6b Disrupted HPCB3_15456_G21206.1_141163089
hsa-miR-4740-5p gaccaaCAGTCCagc AGGACUGA m6b Disrupted HPCB3_15456_G21206.1_141163089
hsa-miR-4804-5p gaccaaCCGTCCAgc UUGGACGG m7b Created HPCB3_15456_G21206.1_141163089

Mutation Mutation ID Sample Name Cancer Type
chr3:g.141444240T>C COSM1039201 TCGA-AX-A0J0-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1270 gctgaATCTCCAaga CUGGAGAU m7b Created HPCB3_15456_G21206.1_141163089
hsa-miR-3978 gctgaaTTTCCAaga GUGGAAAG m6b Disrupted HPCB3_15456_G21206.1_141163089
hsa-miR-432-5p gctgaatCTCCAAGa UCUUGGAG m7b Created HPCB3_15456_G21206.1_141163089
hsa-miR-4531 gctgaaTCTCCAaga AUGGAGAA m6b Created HPCB3_15456_G21206.1_141163089
hsa-miR-4683 gctgaATCTCCAaga UGGAGAUC m7a Created HPCB3_15456_G21206.1_141163089
hsa-miR-5093 gctgaATTTCCaaga AGGAAAUG m6b Disrupted HPCB3_15456_G21206.1_141163089
hsa-miR-620 gctgaATCTCCAaga AUGGAGAU m7b Created HPCB3_15456_G21206.1_141163089

Mutation Mutation ID Sample Name Cancer Type
chr3:g.141442767T>C COSM479506 TCGA-BP-4970-01 [kidney][NS][carcinoma][clear_cell_renal_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1253 tcgcaaCTTCTCaaa AGAGAAGA m6b Disrupted HPCB3_15455_G21205.1_141161600
hsa-miR-377-5p tcgCAACCTCTcaaa AGAGGUUG m8a Created HPCB3_15455_G21205.1_141161600
hsa-miR-495-5p tcGCAACTTCtcaaa GAAGUUGC m8a Disrupted HPCB3_15455_G21205.1_141161600
hsa-miR-580-3p tcgcaacTTCTCAAa UUGAGAAU m7a Disrupted HPCB3_15455_G21205.1_141161600
hsa-miR-6086 tcgCAACCTCtcaaa GGAGGUUG m7b Created HPCB3_15455_G21205.1_141161600
hsa-miR-6770-5p tcgcaaCTTCTCAaa UGAGAAGG m7a Disrupted HPCB3_15455_G21205.1_141161600

Mutation Mutation ID Sample Name Cancer Type
chr3:g.141442762G>A COSM3124636 SNU-175 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-382-5p actgatcACAACTTc GAAGUUGU m7b Created HPCB3_15455_G21205.1_141161600
hsa-miR-495-5p actgatcGCAACTTc GAAGUUGC m7b Disrupted HPCB3_15455_G21205.1_141161600
hsa-miR-8070 actgATCACAacttc AUGUGAUU m6b Created HPCB3_15455_G21205.1_141161600
hsa-miR-382-5p actgatcACAACTTc GAAGUUGU m7b Created HPCB3_15455_G21205.1_141161600
hsa-miR-495-5p actgatcGCAACTTc GAAGUUGC m7b Disrupted HPCB3_15455_G21205.1_141161600
hsa-miR-8070 actgATCACAacttc AUGUGAUU m6b Created HPCB3_15455_G21205.1_141161600

Mutation Mutation ID Sample Name Cancer Type
chr3:g.141442662T>G COSM3365020 TCGA-BP-4761-01 [kidney][NS][carcinoma][clear_cell_renal_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1183 ttatatCTACAGTtc CACUGUAG m7b Disrupted HPCB3_15454_G21204.1_141161503
hsa-miR-376a-2-5p ttatATCTACagttc GGUAGAUU m6b Disrupted HPCB3_15454_G21204.1_141161503
hsa-miR-3935 ttaTATCTACAgttc UGUAGAUA m8a Disrupted HPCB3_15454_G21204.1_141161503

Mutation Mutation ID Sample Name Cancer Type
chr3:g.141442655T>A COSM3724216 327 [upper_aerodigestive_tract][mouth][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID

No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.
*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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