SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001080409
Gene Symbol: ZNF99

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr19:g.22757059C>G COSM1525006 TCGA-50-5930-01 [lung][right_lower_lobe][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-183-3p gcTAATTCAtactag GUGAAUUA m7b (m7b->m6b) HPCB3_11584_G15728.1_22939854
hsa-miR-4275 gcTAATTGatactag CCAAUUAC m6b Created HPCB3_11584_G15728.1_22939854

Mutation Mutation ID Sample Name Cancer Type
chr19:g.22757059C>A COSM994030 TCGA-AX-A0J0-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-183-3p gcTAATTCAtactag GUGAAUUA m7b (m7b->m6b) HPCB3_11584_G15728.1_22939854

Mutation Mutation ID Sample Name Cancer Type
chr19:g.22757057T>C COSM1480866 TCGA-E9-A22G-01 [breast][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-648 taattCACACTaggg AAGUGUGC m6b Created HPCB3_11584_G15728.1_22939854

Mutation Mutation ID Sample Name Cancer Type
chr19:g.22757053A>G COSM710672 TCGA-56-6546-01 [lung][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-2355-5p tcataCTGGGGAgaa AUCCCCAG m7b Created HPCB3_11584_G15728.1_22939854
hsa-miR-4287 tcatactAGGGAGAa UCUCCCUU m7a Disrupted HPCB3_11584_G15728.1_22939854
hsa-miR-4469 tcatactAGGGAGaa GCUCCCUC m6b Disrupted HPCB3_11584_G15728.1_22939854
hsa-miR-4685-3p tcatactAGGGAGAa UCUCCCUU m7a Disrupted HPCB3_11584_G15728.1_22939854
hsa-miR-6867-3p tcatactAGGGAGAa CUCUCCCU m7b Disrupted HPCB3_11584_G15728.1_22939854
hsa-miR-7113-3p tcatactAGGGAGaa CCUCCCUG m6b Disrupted HPCB3_11584_G15728.1_22939854
Mutation Mutation ID Sample Name Cancer Type
chr19:g.22756309C>T COSM4849773 TCGA-IR-A3LL-01 [cervix][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr19:g.22756255C>A COSM265197 TCGA-AG-A002-01 [large_intestine][rectum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4426 taaCCATCTTtcagc GAAGAUGG m7b Disrupted HPCB3_11582_G15726.1_22939062
hsa-miR-4647 taaCCATCTTtcagc GAAGAUGG m7b Disrupted HPCB3_11582_G15726.1_22939062
hsa-miR-4662b taaCCATCTTTcagc AAAGAUGG m8a Disrupted HPCB3_11582_G15726.1_22939062
hsa-miR-4766-5p taaccatCTTTCAGc UCUGAAAG m7b Disrupted HPCB3_11582_G15726.1_22939062
hsa-miR-5583-3p taaCCATATTtcagc GAAUAUGG m7b Created HPCB3_11582_G15726.1_22939062
hsa-miR-584-5p tAACCATAtttcagc UUAUGGUU m7b Created HPCB3_11582_G15726.1_22939062

Mutation Mutation ID Sample Name Cancer Type
chr19:g.22756252T>G COSM4447630 CSCC-55-T [skin][head_neck][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-2276-3p ccatCTTGCAGccct UCUGCAAG m7b Created HPCB3_11582_G15726.1_22939062
hsa-miR-4656 ccatcttTCAGCCCt UGGGCUGA m7b Disrupted HPCB3_11582_G15726.1_22939062
hsa-miR-4662b CCATCTTTcagccct AAAGAUGG m8a Disrupted HPCB3_11582_G15726.1_22939062
hsa-miR-4766-5p ccatCTTTCAGccct UCUGAAAG m7b Disrupted HPCB3_11582_G15726.1_22939062
hsa-miR-6829-5p ccatcttGCAGCCCt UGGGCUGC m7b Created HPCB3_11582_G15726.1_22939062

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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