SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001077498
Gene Symbol: FAM222B

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr17:g.28759209C>A COSM115788 TCGA-13-1510-01 [ovary][NS][carcinoma][serous_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-5681a ctatccCCCTTTCaa AGAAAGGG m7b Disrupted HPCB3_9618_G13241.1_27086230
hsa-miR-526b-3p ctatccCACTTTCaa GAAAGUGC m7a Created HPCB3_9618_G13241.1_27086230
hsa-miR-6794-5p ctaTCCCCCTttcaa CAGGGGGA m7b Disrupted HPCB3_9618_G13241.1_27086230
hsa-miR-6730-5p ctatcccCCTTTCaa AGAAAGGU m6b Disrupted HPCB3_9618_G13241.1_27086230
hsa-miR-4525 ctATCCCCCtttcaa GGGGGGAU m7b (m7b->m6b) HPCB3_9618_G13241.1_27086230
hsa-miR-5010-5p ctATCCCCCTttcaa AGGGGGAU m8a Disrupted HPCB3_9618_G13241.1_27086230
hsa-miR-488-3p ctatcccCCTTTCAa UUGAAAGG m7b Disrupted HPCB3_9618_G13241.1_27086230
hsa-miR-4796-3p ctatcCCACTTTcaa UAAAGUGG m7b Created HPCB3_9618_G13241.1_27086230
hsa-miR-4769-5p ctATCCCACtttcaa GGUGGGAU m7b (m6b->m7b) HPCB3_9618_G13241.1_27086230
hsa-miR-4716-3p ctaTCCCCCTTtcaa AAGGGGGA m8a Disrupted HPCB3_9618_G13241.1_27086230
hsa-miR-4654 ctATCCCACtttcaa UGUGGGAU m7b (m6b->m7b) HPCB3_9618_G13241.1_27086230

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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