SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001077397
Gene Symbol: IRF2BP2

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr1:g.234607665C>T COSM4924455 TCGA-CC-A7IJ-01 [liver][NS][carcinoma][hepatocellular_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6723-5p acCGGACTAcaccgc AUAGUCCG m7b (m6b->m7b) HPSEF_2419_G2896.1_234743407

Mutation Mutation ID Sample Name Cancer Type
chr1:g.234607555C>NC COSM425626 TCGA-A2-A0CU-01 [breast][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-504-3p gttCACTCCactacc GGGAGUGC m6b Disrupted HPSEF_2418_G2895.1_234743302
hsa-miR-6849-5p gttcacTCCACTacc GAGUGGAU m6b Disrupted HPSEF_2418_G2895.1_234743302

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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