SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001077349
Gene Symbol: ZNF682

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr19:g.20006840G>T COSM993474 TCGA-B5-A11E-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-183-3p cataagaTAATTCAc GUGAAUUA m7b Created HHRBC_6510_BC3-2of3-SCL_13002
hsa-miR-4452 cataagaGAATTCAc UUGAAUUC m7b Disrupted HHRBC_6510_BC3-2of3-SCL_13002
hsa-miR-5571-5p cataaGAGAATTcac CAAUUCUC m7b Disrupted HHRBC_6510_BC3-2of3-SCL_13002
hsa-miR-6809-3p catAAGAGAAttcac CUUCUCUU m7b Disrupted HHRBC_6510_BC3-2of3-SCL_13002

Mutation Mutation ID Sample Name Cancer Type
chr19:g.20006833C>T COSM3726225 344634 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-16-1-3p gaattcATACTGGag CCAGUAUU m7a Created HHRBC_6510_BC3-2of3-SCL_13002
hsa-miR-183-3p gAATTCACactggag GUGAAUUA m7a Disrupted HHRBC_6510_BC3-2of3-SCL_13002
hsa-miR-199a-5p gaattcACACTGGag CCCAGUGU m7b Disrupted HHRBC_6510_BC3-2of3-SCL_13002
hsa-miR-199b-5p gaattcACACTGGag CCCAGUGU m7b Disrupted HHRBC_6510_BC3-2of3-SCL_13002
hsa-miR-4302 gaattCACACTGGag CCAGUGUG m8a Disrupted HHRBC_6510_BC3-2of3-SCL_13002

Mutation Mutation ID Sample Name Cancer Type
chr19:g.20006829G>T COSM1480831 TCGA-D8-A1JL-01 [breast][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-199a-5p tcACACTGGagagaa CCCAGUGU m7b (m7b->m6b) HHRBC_6510_BC3-2of3-SCL_13002
hsa-miR-199b-5p tcACACTGGagagaa CCCAGUGU m7b (m7b->m6b) HHRBC_6510_BC3-2of3-SCL_13002
hsa-miR-3925-3p tcacACTGGAGagaa ACUCCAGU m7b Disrupted HHRBC_6510_BC3-2of3-SCL_13002
hsa-miR-4302 tCACACTGGagagaa CCAGUGUG m8a (m8a->m7a) HHRBC_6510_BC3-2of3-SCL_13002
hsa-miR-4465 tcacACTTGAGagaa CUCAAGUA m7a Created HHRBC_6510_BC3-2of3-SCL_13002
hsa-miR-513c-5p tcacaCTTGAGAgaa UUCUCAAG m7b Created HHRBC_6510_BC3-2of3-SCL_13002
hsa-miR-514b-5p tcacaCTTGAGAgaa UUCUCAAG m7b Created HHRBC_6510_BC3-2of3-SCL_13002
hsa-miR-595 tCACACTTgagagaa GAAGUGUG m7b Created HHRBC_6510_BC3-2of3-SCL_13002
hsa-miR-6513-3p tcACACTTGAgagaa UCAAGUGU m8a Created HHRBC_6510_BC3-2of3-SCL_13002
hsa-miR-6845-3p tcacactGGAGAGaa CCUCUCCU m6b Disrupted HHRBC_6510_BC3-2of3-SCL_13002
hsa-miR-766-3p tcacaCTGGAGagaa ACUCCAGC m6b Disrupted HHRBC_6510_BC3-2of3-SCL_13002

Mutation Mutation ID Sample Name Cancer Type
chr19:g.20006826G>A COSM4556047 CSCC-47-T [skin][head_neck][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3124-3p cactGGAAAGaaacc ACUUUCCU m6b Created HHRBC_6510_BC3-2of3-SCL_13002
hsa-miR-3180-5p caCTGGAAagaaacc CUUCCAGA m6b Created HHRBC_6510_BC3-2of3-SCL_13002
hsa-miR-4768-5p cactgGAGAGAAacc AUUCUCUC m7b Disrupted HHRBC_6510_BC3-2of3-SCL_13002
hsa-miR-6809-3p cactggAGAGAAacc CUUCUCUU m6b Disrupted HHRBC_6510_BC3-2of3-SCL_13002
hsa-miR-6833-3p cactgGAGAGAAAcc UUUCUCUC m8a Disrupted HHRBC_6510_BC3-2of3-SCL_13002
hsa-miR-6845-3p cactGGAGAGaaacc CCUCUCCU m6b Disrupted HHRBC_6510_BC3-2of3-SCL_13002
hsa-miR-6873-3p cactgGAGAGAAacc UUCUCUCU m7a Disrupted HHRBC_6510_BC3-2of3-SCL_13002
hsa-miR-766-3p caCTGGAGagaaacc ACUCCAGC m6b Disrupted HHRBC_6510_BC3-2of3-SCL_13002

Mutation Mutation ID Sample Name Cancer Type
chr19:g.20006824G>T COSM1234469 587336 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-29b-2-5p ctggagaGAAACCAt CUGGUUUC m7b Disrupted HHRBC_6510_BC3-2of3-SCL_13002
hsa-miR-4768-5p ctgGAGAGAAaccat AUUCUCUC m7b Disrupted HHRBC_6510_BC3-2of3-SCL_13002
hsa-miR-6809-3p ctggAGAGAAaccat CUUCUCUU m6b Disrupted HHRBC_6510_BC3-2of3-SCL_13002
hsa-miR-6833-3p ctgGAGAGAAAccat UUUCUCUC m8a Disrupted HHRBC_6510_BC3-2of3-SCL_13002
hsa-miR-6845-3p ctGGAGAGaaaccat CCUCUCCU m6b Disrupted HHRBC_6510_BC3-2of3-SCL_13002
hsa-miR-6873-3p ctgGAGAGAAaccat UUCUCUCU m7a Disrupted HHRBC_6510_BC3-2of3-SCL_13002

Mutation Mutation ID Sample Name Cancer Type
chr19:g.20006823A>C COSM993473 TCGA-AX-A0J0-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-29b-2-5p tggagaGAAACCAta CUGGUUUC m7b Disrupted HHRBC_6510_BC3-2of3-SCL_13002
hsa-miR-4768-5p tgGAGAGAAaccata AUUCUCUC m7b (m7b->m6b) HHRBC_6510_BC3-2of3-SCL_13002
hsa-miR-656-5p tggagaGCAACCata AGGUUGCC m6b Created HHRBC_6510_BC3-2of3-SCL_13002
hsa-miR-6809-3p tggAGAGAAaccata CUUCUCUU m6b Disrupted HHRBC_6510_BC3-2of3-SCL_13002
hsa-miR-6833-3p tgGAGAGAAAccata UUUCUCUC m8a Disrupted HHRBC_6510_BC3-2of3-SCL_13002
hsa-miR-6873-3p tgGAGAGAAaccata UUCUCUCU m7a (m7a->m6a) HHRBC_6510_BC3-2of3-SCL_13002
hsa-miR-758-5p tggagagCAACCATa GAUGGUUG m7b Created HHRBC_6510_BC3-2of3-SCL_13002

Mutation Mutation ID Sample Name Cancer Type
chr19:g.20006818A>C COSM341779 LUAD-LC15C [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-135b-3p agaaaCCCTACAaat AUGUAGGG m7b Created HHRBC_6510_BC3-2of3-SCL_13002
hsa-miR-218-2-3p agaAACCATacaaat CAUGGUUC m6b Disrupted HHRBC_6510_BC3-2of3-SCL_13002
hsa-miR-296-3p agaAACCCTacaaat GAGGGUUG m6b Created HHRBC_6510_BC3-2of3-SCL_13002
hsa-miR-297 agaaacCATACAaat AUGUAUGU m6b Disrupted HHRBC_6510_BC3-2of3-SCL_13002
hsa-miR-29b-2-5p aGAAACCAtacaaat CUGGUUUC m7b Disrupted HHRBC_6510_BC3-2of3-SCL_13002
hsa-miR-3149 agaaacCATACAAAt UUUGUAUG m8a Disrupted HHRBC_6510_BC3-2of3-SCL_13002
hsa-miR-3674 agaaaccCTACAAat AUUGUAGA m6b Created HHRBC_6510_BC3-2of3-SCL_13002
hsa-miR-584-5p agaAACCATAcaaat UUAUGGUU m7b Disrupted HHRBC_6510_BC3-2of3-SCL_13002
hsa-miR-675-3p agaaacCATACAaat CUGUAUGC m6b Disrupted HHRBC_6510_BC3-2of3-SCL_13002
hsa-miR-758-5p agaAACCATacaaat GAUGGUUG m6b Disrupted HHRBC_6510_BC3-2of3-SCL_13002

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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