SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database

Prediction criteria: TargetScan sites only     All 6mer or longer seed matches

Transcript ID: NM_001045
Gene Symbol: SLC6A4

Somatic mutations that impact miRNA target sites



Mutation Mutation ID Sample Name Cancer Type
chr17:g.30203175A>C COSM3680126 SNUH_G45_S1 [haematopoietic_and_lymphoid_tissue][NS][haematopoietic_neoplasm][acute_myeloid_leukaemia]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-302b-5p catTTAAAGaggtac ACUUUAAC m6b Disrupted HPCB3_9651_G13275.1_28530183
hsa-miR-302d-5p catTTAAAGaggtac ACUUUAAC m6b Disrupted HPCB3_9651_G13275.1_28530183
hsa-miR-6800-3p catttaaAGAGGTac CACCUCUC m6b Disrupted HPCB3_9651_G13275.1_28530183

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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