SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001044305
Gene Symbol: SMAP1
Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr6:g.70856971C>T COSM1697529 YUGOE [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3978 caaCTTTCCAaagac GUGGAAAG m7b Disrupted HPCB3_19796_G27184.1_71566672
hsa-miR-510-3p caactTTTCAAagac AUUGAAAC m6b Created HPCB3_19796_G27184.1_71566672
hsa-miR-3978 caaCTTTCCAaagac GUGGAAAG m7b Disrupted HPCB3_19796_G27184.1_71566672
hsa-miR-510-3p caactTTTCAAagac AUUGAAAC m6b Created HPCB3_19796_G27184.1_71566672

Mutation Mutation ID Sample Name Cancer Type
chr6:g.70856967C>T COSM1081314 TCGA-D1-A17L-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3148 gaaacaaTTTTCCAa UGGAAAAA m7a Created HPCB3_19796_G27184.1_71566672
hsa-miR-382-5p gaaACAACTTtccaa GAAGUUGU m7b Disrupted HPCB3_19796_G27184.1_71566672
hsa-miR-3978 gaaacaaCTTTCCAa GUGGAAAG m7b Disrupted HPCB3_19796_G27184.1_71566672
hsa-miR-6124 gaaacaaTTTTCCaa GGGAAAAG m6b Created HPCB3_19796_G27184.1_71566672

Mutation Mutation ID Sample Name Cancer Type
chr6:g.70856905C>T COSM421250 TCGA-BT-A20J-01 [urinary_tract][bladder][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-2355-5p gtaacatCTGGGGAt AUCCCCAG m7b Disrupted HPCB3_19795_G27183.1_71566595
hsa-miR-2355-5p gtaacatCTGGGGAt AUCCCCAG m7b Disrupted HPCB3_19795_G27183.1_71566595

Mutation Mutation ID Sample Name Cancer Type
chr6:g.70856890T>G COSM3875249 TCGA-BR-8361-01 [stomach][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-296-3p gCAACCCTgtctaca GAGGGUUG m7b Disrupted HPCB3_19795_G27183.1_71566595
hsa-miR-4524b-3p gcaacCCTGTCTaca GAGACAGG m7b Disrupted HPCB3_19795_G27183.1_71566595
hsa-miR-6823-5p gcAACCCTGtctaca UCAGGGUU m7b (m7b->m6b) HPCB3_19795_G27183.1_71566595
hsa-miR-296-3p gCAACCCTgtctaca GAGGGUUG m7b Disrupted HPCB3_19795_G27183.1_71566595
hsa-miR-4524b-3p gcaacCCTGTCTaca GAGACAGG m7b Disrupted HPCB3_19795_G27183.1_71566595
hsa-miR-6823-5p gcAACCCTGtctaca UCAGGGUU m7b (m7b->m6b) HPCB3_19795_G27183.1_71566595
hsa-miR-296-3p gCAACCCTgtctaca GAGGGUUG m7b Disrupted HPCB3_19795_G27183.1_71566595
hsa-miR-4524b-3p gcaacCCTGTCTaca GAGACAGG m7b Disrupted HPCB3_19795_G27183.1_71566595
hsa-miR-6823-5p gcAACCCTGtctaca UCAGGGUU m7b (m7b->m6b) HPCB3_19795_G27183.1_71566595

Mutation Mutation ID Sample Name Cancer Type
chr6:g.70791722G>T COSM3928583 TCGA-FG-A4MU-01 [central_nervous_system][brain][glioma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-495-3p gccTTTGTTatcctc AAACAAAC m6b Created HPCB3_19792_G27180.1_71501423
hsa-miR-7-1-3p gccTTTGTTatcctc CAACAAAU m6b Created HPCB3_19792_G27180.1_71501423
hsa-miR-7-2-3p gccTTTGTTatcctc CAACAAAU m6b Created HPCB3_19792_G27180.1_71501423

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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