SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001044305
Gene Symbol: SMAP1
Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr6:g.70856905C>T COSM421250 TCGA-BT-A20J-01 [urinary_tract][bladder][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-2355-5p gtaacatCTGGGGAt AUCCCCAG m7b Disrupted HHRBC_11362_BC3-2of3-SCL_3793
hsa-miR-2355-5p gtaacatCTGGGGAt AUCCCCAG m7b Disrupted HHRBC_11362_BC3-2of3-SCL_3793

Mutation Mutation ID Sample Name Cancer Type
chr6:g.70856890T>G COSM3875249 TCGA-BR-8361-01 [stomach][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-296-3p gCAACCCTgtctaca GAGGGUUG m7b Disrupted HHRBC_11362_BC3-2of3-SCL_3793
hsa-miR-4524b-3p gcaacCCTGTCTaca GAGACAGG m7b Disrupted HHRBC_11362_BC3-2of3-SCL_3793
hsa-miR-6823-5p gcAACCCTGtctaca UCAGGGUU m7b (m7b->m6b) HHRBC_11362_BC3-2of3-SCL_3793
hsa-miR-296-3p gCAACCCTgtctaca GAGGGUUG m7b Disrupted HHRBC_11362_BC3-2of3-SCL_3793
hsa-miR-4524b-3p gcaacCCTGTCTaca GAGACAGG m7b Disrupted HHRBC_11362_BC3-2of3-SCL_3793
hsa-miR-6823-5p gcAACCCTGtctaca UCAGGGUU m7b (m7b->m6b) HHRBC_11362_BC3-2of3-SCL_3793
hsa-miR-296-3p gCAACCCTgtctaca GAGGGUUG m7b Disrupted HHRBC_11362_BC3-2of3-SCL_3793
hsa-miR-4524b-3p gcaacCCTGTCTaca GAGACAGG m7b Disrupted HHRBC_11362_BC3-2of3-SCL_3793
hsa-miR-6823-5p gcAACCCTGtctaca UCAGGGUU m7b (m7b->m6b) HHRBC_11362_BC3-2of3-SCL_3793

Mutation Mutation ID Sample Name Cancer Type
chr6:g.70856877G>A COSM1194306 H650 [lung][NS][carcinoma][non_small_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-133a-5p tgcACCAGCagctgc AGCUGGUA m6b Disrupted HHRBC_11362_BC3-2of3-SCL_3793
hsa-miR-138-5p tgCACCAGCagctgc AGCUGGUG m7b (m7b->m6b) HHRBC_11362_BC3-2of3-SCL_3793
hsa-miR-3692-5p tgcaCCAGCAGctgc CCUGCUGG m7b Disrupted HHRBC_11362_BC3-2of3-SCL_3793
hsa-miR-4299 tgCACCAGCagctgc GCUGGUGA m7a (m7a->m6a) HHRBC_11362_BC3-2of3-SCL_3793
hsa-miR-548q tGCACCAGCagctgc GCUGGUGC m8a (m8a->m7a) HHRBC_11362_BC3-2of3-SCL_3793
hsa-miR-6131 tgcACCAGCagctgc GGCUGGUC m6b Disrupted HHRBC_11362_BC3-2of3-SCL_3793
hsa-miR-133a-5p tgcACCAGCagctgc AGCUGGUA m6b Disrupted HHRBC_11362_BC3-2of3-SCL_3793
hsa-miR-138-5p tgCACCAGCagctgc AGCUGGUG m7b (m7b->m6b) HHRBC_11362_BC3-2of3-SCL_3793
hsa-miR-3692-5p tgcaCCAGCAGctgc CCUGCUGG m7b Disrupted HHRBC_11362_BC3-2of3-SCL_3793
hsa-miR-4299 tgCACCAGCagctgc GCUGGUGA m7a (m7a->m6a) HHRBC_11362_BC3-2of3-SCL_3793
hsa-miR-548q tGCACCAGCagctgc GCUGGUGC m8a (m8a->m7a) HHRBC_11362_BC3-2of3-SCL_3793
hsa-miR-6131 tgcACCAGCagctgc GGCUGGUC m6b Disrupted HHRBC_11362_BC3-2of3-SCL_3793

Mutation Mutation ID Sample Name Cancer Type
chr6:g.70856876A>G COSM1546865 TCGA-95-7039-01 [lung][right_upper_lobe][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-133a-5p ctgcACCAGCagctg AGCUGGUA m6b Disrupted HHRBC_11362_BC3-2of3-SCL_3793
hsa-miR-138-5p ctgCACCAGCagctg AGCUGGUG m7b Disrupted HHRBC_11362_BC3-2of3-SCL_3793
hsa-miR-22-3p ctgcaccGGCAGCTg AAGCUGCC m7b Created HHRBC_11362_BC3-2of3-SCL_3793
hsa-miR-3692-5p ctgcaCCAGCAGctg CCUGCUGG m7b Disrupted HHRBC_11362_BC3-2of3-SCL_3793
hsa-miR-4299 ctgCACCAGCagctg GCUGGUGA m7a Disrupted HHRBC_11362_BC3-2of3-SCL_3793
hsa-miR-548q ctGCACCAGCagctg GCUGGUGC m8a Disrupted HHRBC_11362_BC3-2of3-SCL_3793
hsa-miR-6131 ctgcACCAGCagctg GGCUGGUC m6b Disrupted HHRBC_11362_BC3-2of3-SCL_3793
hsa-miR-133a-5p ctgcACCAGCagctg AGCUGGUA m6b Disrupted HHRBC_11362_BC3-2of3-SCL_3793
hsa-miR-138-5p ctgCACCAGCagctg AGCUGGUG m7b Disrupted HHRBC_11362_BC3-2of3-SCL_3793
hsa-miR-22-3p ctgcaccGGCAGCTg AAGCUGCC m7b Created HHRBC_11362_BC3-2of3-SCL_3793
hsa-miR-3692-5p ctgcaCCAGCAGctg CCUGCUGG m7b Disrupted HHRBC_11362_BC3-2of3-SCL_3793
hsa-miR-4299 ctgCACCAGCagctg GCUGGUGA m7a Disrupted HHRBC_11362_BC3-2of3-SCL_3793
hsa-miR-548q ctGCACCAGCagctg GCUGGUGC m8a Disrupted HHRBC_11362_BC3-2of3-SCL_3793
hsa-miR-6131 ctgcACCAGCagctg GGCUGGUC m6b Disrupted HHRBC_11362_BC3-2of3-SCL_3793

Mutation Mutation ID Sample Name Cancer Type
chr6:g.70856859G>T COSM1197398 H2073 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-125a-5p gtCTCAGGGgacacc UCCCUGAG m7b (m7b->m6b) HHRBC_11362_BC3-2of3-SCL_3793
hsa-miR-125b-5p gtCTCAGGGgacacc UCCCUGAG m7b (m7b->m6b) HHRBC_11362_BC3-2of3-SCL_3793
hsa-miR-1273g-3p gtctCAGTGGacacc ACCACUGC m6b Created HHRBC_11362_BC3-2of3-SCL_3793
hsa-miR-181a-2-3p gtcTCAGTGGacacc ACCACUGA m7b Created HHRBC_11362_BC3-2of3-SCL_3793
hsa-miR-331-3p gtctCAGGGGacacc GCCCCUGG m6b Disrupted HHRBC_11362_BC3-2of3-SCL_3793
hsa-miR-3657 gtctcagGGGACACc UGUGUCCC m7b Disrupted HHRBC_11362_BC3-2of3-SCL_3793
hsa-miR-4319 gtCTCAGGGgacacc UCCCUGAG m7b (m7b->m6b) HHRBC_11362_BC3-2of3-SCL_3793
hsa-miR-4324 gTCTCAGGGgacacc CCCUGAGA m8a (m8a->m7a) HHRBC_11362_BC3-2of3-SCL_3793
hsa-miR-4329 GTCTCAGGggacacc CCUGAGAC m8a Disrupted HHRBC_11362_BC3-2of3-SCL_3793
hsa-miR-4436b-5p gtctcAGTGGACacc GUCCACUU m7a Created HHRBC_11362_BC3-2of3-SCL_3793
hsa-miR-6509-3p gtctCAGTGGAcacc UUCCACUG m7b Created HHRBC_11362_BC3-2of3-SCL_3793
hsa-miR-6801-3p gtctCAGGGGacacc ACCCCUGC m6b Disrupted HHRBC_11362_BC3-2of3-SCL_3793
hsa-miR-125a-5p gtCTCAGGGgacacc UCCCUGAG m7b (m7b->m6b) HHRBC_11362_BC3-2of3-SCL_3793
hsa-miR-125b-5p gtCTCAGGGgacacc UCCCUGAG m7b (m7b->m6b) HHRBC_11362_BC3-2of3-SCL_3793
hsa-miR-1273g-3p gtctCAGTGGacacc ACCACUGC m6b Created HHRBC_11362_BC3-2of3-SCL_3793
hsa-miR-181a-2-3p gtcTCAGTGGacacc ACCACUGA m7b Created HHRBC_11362_BC3-2of3-SCL_3793
hsa-miR-331-3p gtctCAGGGGacacc GCCCCUGG m6b Disrupted HHRBC_11362_BC3-2of3-SCL_3793
hsa-miR-3657 gtctcagGGGACACc UGUGUCCC m7b Disrupted HHRBC_11362_BC3-2of3-SCL_3793
hsa-miR-4319 gtCTCAGGGgacacc UCCCUGAG m7b (m7b->m6b) HHRBC_11362_BC3-2of3-SCL_3793
hsa-miR-4324 gTCTCAGGGgacacc CCCUGAGA m8a (m8a->m7a) HHRBC_11362_BC3-2of3-SCL_3793
hsa-miR-4329 GTCTCAGGggacacc CCUGAGAC m8a Disrupted HHRBC_11362_BC3-2of3-SCL_3793
hsa-miR-4436b-5p gtctcAGTGGACacc GUCCACUU m7a Created HHRBC_11362_BC3-2of3-SCL_3793
hsa-miR-6509-3p gtctCAGTGGAcacc UUCCACUG m7b Created HHRBC_11362_BC3-2of3-SCL_3793
hsa-miR-6801-3p gtctCAGGGGacacc ACCCCUGC m6b Disrupted HHRBC_11362_BC3-2of3-SCL_3793

Mutation Mutation ID Sample Name Cancer Type
chr6:g.70856858G>T COSM366617 LUAD-F00162 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-125a-5p tgtCTCAGGGgacac UCCCUGAG m7b Disrupted HHRBC_11362_BC3-2of3-SCL_3793
hsa-miR-125b-5p tgtCTCAGGGgacac UCCCUGAG m7b Disrupted HHRBC_11362_BC3-2of3-SCL_3793
hsa-miR-331-3p tgtctCAGGGGacac GCCCCUGG m6b Disrupted HHRBC_11362_BC3-2of3-SCL_3793
hsa-miR-4319 tgtCTCAGGGgacac UCCCUGAG m7b Disrupted HHRBC_11362_BC3-2of3-SCL_3793
hsa-miR-4324 tgTCTCAGGGgacac CCCUGAGA m8a Disrupted HHRBC_11362_BC3-2of3-SCL_3793
hsa-miR-4329 tGTCTCAGGggacac CCUGAGAC m8a (m8a->m7a) HHRBC_11362_BC3-2of3-SCL_3793
hsa-miR-4433a-5p tgtctcaTGGGACac CGUCCCAC m6b Created HHRBC_11362_BC3-2of3-SCL_3793
hsa-miR-4433b-5p tgtctcaTGGGACAc AUGUCCCA m7b Created HHRBC_11362_BC3-2of3-SCL_3793
hsa-miR-6801-3p tgtctCAGGGGacac ACCCCUGC m6b Disrupted HHRBC_11362_BC3-2of3-SCL_3793

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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