SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001044264
Gene Symbol: MSMP

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr9:g.35753752C>T COSM1555085 TCGA-75-6214-01 [lung][right_upper_lobe][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1914-3p atttCCCCTCatagt GGAGGGGU m6b Disrupted HPCB3_23881_G32783.1_35753747
hsa-miR-3179 atttCCCTTCatagt AGAAGGGG m6b Created HPCB3_23881_G32783.1_35753747
hsa-miR-5584-5p aTTTCCCTtcatagt CAGGGAAA m7b Created HPCB3_23881_G32783.1_35753747
hsa-miR-6734-5p atttCCCCTCAtagt UUGAGGGG m7b Disrupted HPCB3_23881_G32783.1_35753747
hsa-miR-6738-5p atttCCCCTCatagt CGAGGGGU m6b Disrupted HPCB3_23881_G32783.1_35753747
hsa-miR-6783-5p atTTCCCCTcatagt UAGGGGAA m7b (m7b->m6b) HPCB3_23881_G32783.1_35753747
hsa-miR-6864-5p atttCCCTTCAtagt UUGAAGGG m7b Created HPCB3_23881_G32783.1_35753747
hsa-miR-7515 attTCCCTTCatagt AGAAGGGA m7b Created HPCB3_23881_G32783.1_35753747

Mutation Mutation ID Sample Name Cancer Type
chr9:g.35753749C>T COSM4528072 CSCC-27-T [skin][head_neck][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1914-3p aatatttCCCCTCat GGAGGGGU m6b Disrupted HPCB3_23881_G32783.1_35753747
hsa-miR-4668-5p aataTTTTCCCTcat AGGGAAAA m8a Created HPCB3_23881_G32783.1_35753747
hsa-miR-5584-5p aatatTTTCCCTcat CAGGGAAA m7b Created HPCB3_23881_G32783.1_35753747
hsa-miR-6734-5p aatatttCCCCTCAt UUGAGGGG m7b Disrupted HPCB3_23881_G32783.1_35753747
hsa-miR-6738-5p aatatttCCCCTCat CGAGGGGU m6b Disrupted HPCB3_23881_G32783.1_35753747
hsa-miR-6783-5p aatatTTCCCCTcat UAGGGGAA m7b Disrupted HPCB3_23881_G32783.1_35753747
hsa-miR-6834-5p aatatttTCCCTCAt GUGAGGGA m7b Created HPCB3_23881_G32783.1_35753747

Mutation Mutation ID Sample Name Cancer Type
chr9:g.35753747T>G COSM1132491 TCGA-CH-5737-01 [prostate][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6783-5p aaaatatTTCCCCTc UAGGGGAA m7b Disrupted HPCB3_23881_G32783.1_35753747

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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