SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001043318
Gene Symbol: ELMSAN1

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr14:g.73729731C>T COSM4435738 451 [upper_aerodigestive_tract][mouth][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4786-5p gctcTGGTCTCtact UGAGACCA m7b Created HPSEF_7481_G8989.1_74196421
hsa-miR-6832-5p gctctggTCTCTACt AGUAGAGA m7b Created HPSEF_7481_G8989.1_74196421
hsa-miR-6866-5p gctctgGCCTCTAct UUAGAGGC m7b Disrupted HPSEF_7481_G8989.1_74196421

Mutation Mutation ID Sample Name Cancer Type
chr14:g.73729718G>C COSM1316072 LPJ041 [haematopoietic_and_lymphoid_tissue][NS][lymphoid_neoplasm][follicular_lymphoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1256 cttCAATGCCatcat AGGCAUUG m7b Disrupted HPSEF_7481_G8989.1_74196421
hsa-miR-5089-5p cttcAATCCCAtcat GUGGGAUU m7b Created HPSEF_7481_G8989.1_74196421

Mutation Mutation ID Sample Name Cancer Type
chr14:g.73729713C>G COSM1748976 B55-Tumor [urinary_tract][bladder][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1272 atgcCATCATatcaa GAUGAUGA m6b Disrupted HPSEF_7481_G8989.1_74196421
hsa-miR-1322 atgcCATCATatcaa GAUGAUGC m6b Disrupted HPSEF_7481_G8989.1_74196421
hsa-miR-144-5p atgccaTGATATCaa GGAUAUCA m7b Created HPSEF_7481_G8989.1_74196421
hsa-miR-190a-5p atgccatCATATCAa UGAUAUGU m7a Disrupted HPSEF_7481_G8989.1_74196421
hsa-miR-190b atgccatCATATCAa UGAUAUGU m7a Disrupted HPSEF_7481_G8989.1_74196421
hsa-miR-2681-3p atgCCATGATAtcaa UAUCAUGG m8a Created HPSEF_7481_G8989.1_74196421
hsa-miR-3074-3p atgccaTGATATCaa GAUAUCAG m7a Created HPSEF_7481_G8989.1_74196421
hsa-miR-96-3p atgcCATGATatcaa AAUCAUGU m6b Created HPSEF_7481_G8989.1_74196421

Mutation Mutation ID Sample Name Cancer Type
chr14:g.73719343G>A COSM957674 TCGA-B5-A11R-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-29a-5p agacccaAAATCAGg ACUGAUUU m7b Created HPSEF_7480_G8988.1_74186052
hsa-miR-4314 agaCCCAGAatcagg CUCUGGGA m6b Disrupted HPSEF_7480_G8988.1_74186052
hsa-miR-6776-5p agACCCAGAatcagg UCUGGGUG m7a (m7a->m6a) HPSEF_7480_G8988.1_74186052

Mutation Mutation ID Sample Name Cancer Type
chr14:g.73719339C>G COSM88512 OCC06PT [ovary][NS][carcinoma][clear_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1200 ccagaaTCAGGAGaa CUCCUGAG m7a Disrupted HPSEF_7480_G8988.1_74186052
hsa-miR-1976 ccagaatCAGGAGaa CCUCCUGC m6b Disrupted HPSEF_7480_G8988.1_74186052
hsa-miR-3653-5p ccagaaTCAGGAGaa CCUCCUGA m7b Disrupted HPSEF_7480_G8988.1_74186052
hsa-miR-378a-5p ccagaaTCAGGAGaa CUCCUGAC m7a Disrupted HPSEF_7480_G8988.1_74186052
hsa-miR-4279 ccagaatGAGGAGAa CUCUCCUC m7b Created HPSEF_7480_G8988.1_74186052
hsa-miR-6758-3p ccaGAATGAGgagaa ACUCAUUC m7b Created HPSEF_7480_G8988.1_74186052
hsa-miR-6891-3p ccagaATGAGGagaa CCCUCAUC m6b Created HPSEF_7480_G8988.1_74186052

Mutation Mutation ID Sample Name Cancer Type
chr14:g.73719334G>A COSM957673 TCGA-BS-A0UV-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3074-5p atCAGGAAaacactt GUUCCUGC m6b Created HPSEF_7480_G8988.1_74186052
hsa-miR-3653-5p aTCAGGAGaacactt CCUCCUGA m7b Disrupted HPSEF_7480_G8988.1_74186052
hsa-miR-378a-5p aTCAGGAGaacactt CUCCUGAC m7a Disrupted HPSEF_7480_G8988.1_74186052
hsa-miR-4255 atcaggaGAACACTt CAGUGUUC m7b Disrupted HPSEF_7480_G8988.1_74186052
hsa-miR-4273 atcagGAGAACACtt GUGUUCUC m8a Disrupted HPSEF_7480_G8988.1_74186052
hsa-miR-4279 atcAGGAGAacactt CUCUCCUC m6b Disrupted HPSEF_7480_G8988.1_74186052
hsa-miR-629-3p atcaGGAGAACactt GUUCUCCC m7a Disrupted HPSEF_7480_G8988.1_74186052
hsa-miR-7152-5p atCAGGAAAacactt UUUCCUGU m7a (m6a->m7a) HPSEF_7480_G8988.1_74186052
hsa-miR-7156-5p atcagGAGAACActt UUGUUCUC m7b Disrupted HPSEF_7480_G8988.1_74186052

Mutation Mutation ID Sample Name Cancer Type
chr14:g.73719322CCC>TTC COSM4566124 CSCC-62-T [skin][head_neck][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3153 caCTTTCCCCtgtaaaa GGGGAAAG m8a Disrupted HPSEF_7480_G8988.1_74186052
hsa-miR-6733-5p caCTTTCCCctgtaaaa UGGGAAAG m7b (m7b->m6b) HPSEF_7480_G8988.1_74186052
hsa-miR-6739-5p caCTTTCCCctgtaaaa UGGGAAAG m7b (m7b->m6b) HPSEF_7480_G8988.1_74186052
hsa-miR-6783-5p cactTTCCCCTgtaaaa UAGGGGAA m7b Disrupted HPSEF_7480_G8988.1_74186052

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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