SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001042603
Gene Symbol: KDM5A

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr12:g.283472A>G COSN5942239 RK077_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-101-3p attcttaGTACTGTa UACAGUAC m7b Created HPCB3_5421_G7426.1_392658
hsa-miR-144-3p attcttaATACTGTa UACAGUAU m7b Disrupted HPCB3_5421_G7426.1_392658
hsa-miR-16-1-3p attcttAATACTGta CCAGUAUU m7b Disrupted HPCB3_5421_G7426.1_392658
hsa-miR-4477a attCTTAATActgta CUAUUAAG m7b Disrupted HPCB3_5421_G7426.1_392658

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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