SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001042552
Gene Symbol: TATDN3

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr1:g.212815113C>T COSM277608 TCGA-AA-A00N-01 [large_intestine][caecum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-155-5p cagaatGCATTAAaa UUAAUGCU m7a Disrupted HPCB3_1075_G1486.1_212988446
hsa-miR-181a-5p caGAATGTattaaaa AACAUUCA m6b Created HPCB3_1075_G1486.1_212988446
hsa-miR-181b-5p caGAATGTattaaaa AACAUUCA m6b Created HPCB3_1075_G1486.1_212988446
hsa-miR-181c-5p caGAATGTattaaaa AACAUUCA m6b Created HPCB3_1075_G1486.1_212988446
hsa-miR-181d-5p caGAATGTattaaaa AACAUUCA m6b Created HPCB3_1075_G1486.1_212988446
hsa-miR-374c-5p cagaaTGTATTAaaa AUAAUACA m7b Created HPCB3_1075_G1486.1_212988446
hsa-miR-4262 caGAATGTattaaaa GACAUUCA m6b Created HPCB3_1075_G1486.1_212988446
hsa-miR-5700 cagaATGCATTAaaa UAAUGCAU m8a Disrupted HPCB3_1075_G1486.1_212988446
hsa-miR-586 cagAATGCATtaaaa UAUGCAUU m7b Disrupted HPCB3_1075_G1486.1_212988446
hsa-miR-655-3p cagaaTGTATTAaaa AUAAUACA m7b Created HPCB3_1075_G1486.1_212988446

Mutation Mutation ID Sample Name Cancer Type
chr1:g.212815044C>T COSM3483178 TCGA-EE-A2MS-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-93-3p tctattTCAGCAGaa ACUGCUGA m7b Disrupted HPCB3_1074_G1485.1_212988387
hsa-miR-3692-5p tctatttCAGCAGaa CCUGCUGG m6b Disrupted HPCB3_1074_G1485.1_212988387
hsa-miR-6071 tctatttCAGCAGAa UUCUGCUG m7b Disrupted HPCB3_1074_G1485.1_212988387

Mutation Mutation ID Sample Name Cancer Type
chr1:g.212815038C>A COSM3418718 TCGA-EI-6917-01 [large_intestine][rectum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3121-3p aacattTCTATTTca UAAAUAGA m7b Disrupted HPCB3_1074_G1485.1_212988387
hsa-miR-5680 aaCATTTCTatttca GAGAAAUG m7b (m7b->m6b) HPCB3_1074_G1485.1_212988387

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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