SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions |
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Transcript ID: | NM_001042549 |
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Gene Symbol: | NSL1 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr1:g.212738649C>T | COSM3483167 | TCGA-D9-A1JX-06 | [skin][NS][malignant_melanoma][NS] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-3148 | ggaTTTTTCCAagtt | UGGAAAAA | m8a | Created | HPSEF_2325_G2770.1_212911966 |
hsa-miR-3153 | ggatTTTCCCaagtt | GGGGAAAG | m6b | Disrupted | HPSEF_2325_G2770.1_212911966 |
hsa-miR-3978 | ggattTTTCCAagtt | GUGGAAAG | m6b | Created | HPSEF_2325_G2770.1_212911966 |
hsa-miR-450a-1-3p | ggattTTCCCAAgtt | AUUGGGAA | m7b | Disrupted | HPSEF_2325_G2770.1_212911966 |
hsa-miR-4668-3p | GGATTTTCccaagtt | GAAAAUCC | m8a | Disrupted | HPSEF_2325_G2770.1_212911966 |
hsa-miR-4668-5p | ggaTTTTCCCaagtt | AGGGAAAA | m7b | Disrupted | HPSEF_2325_G2770.1_212911966 |
hsa-miR-548c-3p | gGATTTTTccaagtt | CAAAAAUC | m7b | Created | HPSEF_2325_G2770.1_212911966 |
hsa-miR-6124 | ggaTTTTCCCaagtt | GGGAAAAG | m7a | Disrupted | HPSEF_2325_G2770.1_212911966 |
hsa-miR-6733-5p | ggatTTTCCCAagtt | UGGGAAAG | m7a | Disrupted | HPSEF_2325_G2770.1_212911966 |
hsa-miR-6739-5p | ggatTTTCCCAagtt | UGGGAAAG | m7a | Disrupted | HPSEF_2325_G2770.1_212911966 |
hsa-miR-890 | ggattttTCCAAGTt | UACUUGGA | m7b | Created | HPSEF_2325_G2770.1_212911966 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr1:g.212738648C>T | COSM1338685 | TCGA-D5-6927-01 | [large_intestine][colon][carcinoma][adenocarcinoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-3153 | gatTTTCCCaagttc | GGGGAAAG | m6b | Disrupted | HPSEF_2325_G2770.1_212911966 |
hsa-miR-450a-1-3p | gattTTCCCAAgttc | AUUGGGAA | m7b | Disrupted | HPSEF_2325_G2770.1_212911966 |
hsa-miR-4668-5p | gaTTTTCCCaagttc | AGGGAAAA | m7b | (m7b->m6b) | HPSEF_2325_G2770.1_212911966 |
hsa-miR-539-5p | gatTTTCTCaagttc | GGAGAAAU | m6b | Created | HPSEF_2325_G2770.1_212911966 |
hsa-miR-6124 | gaTTTTCCCaagttc | GGGAAAAG | m7a | (m7a->m6a) | HPSEF_2325_G2770.1_212911966 |
hsa-miR-6733-5p | gatTTTCCCAagttc | UGGGAAAG | m7a | Disrupted | HPSEF_2325_G2770.1_212911966 |
hsa-miR-6739-5p | gatTTTCCCAagttc | UGGGAAAG | m7a | Disrupted | HPSEF_2325_G2770.1_212911966 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr1:g.212738636G>A | COSM532368 | TCGA-64-5781-01 | [lung][NS][carcinoma][adenocarcinoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-1200 | ttCTCAGGAtgcagc | CUCCUGAG | m7b | (m7b->m6b) | HPSEF_2325_G2770.1_212911966 |
hsa-miR-20a-3p | ttctcagAATGCAGc | ACUGCAUU | m7b | Created | HPSEF_2325_G2770.1_212911966 |
hsa-miR-324-5p | ttctcaGGATGCagc | CGCAUCCC | m6b | Disrupted | HPSEF_2325_G2770.1_212911966 |
hsa-miR-4324 | tTCTCAGGatgcagc | CCCUGAGA | m7b | Disrupted | HPSEF_2325_G2770.1_212911966 |
hsa-miR-4329 | tTCTCAGGatgcagc | CCUGAGAC | m7a | Disrupted | HPSEF_2325_G2770.1_212911966 |
hsa-miR-4793-5p | ttctCAGGATGcagc | ACAUCCUG | m7b | Disrupted | HPSEF_2325_G2770.1_212911966 |
hsa-miR-544b | ttCTCAGGatgcagc | ACCUGAGG | m6b | Disrupted | HPSEF_2325_G2770.1_212911966 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr1:g.212738625T>A | COSM4572050 | CSCC-31-T | [skin][head_neck][carcinoma][squamous_cell_carcinoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-1261 | cagcctgTTATCCAc | AUGGAUAA | m7b | Disrupted | HPSEF_2325_G2770.1_212911966 |
hsa-miR-144-5p | cagccTGATATCCac | GGAUAUCA | m8a | Created | HPSEF_2325_G2770.1_212911966 |
hsa-miR-3074-3p | cagcCTGATATCcac | GAUAUCAG | m8a | Created | HPSEF_2325_G2770.1_212911966 |
hsa-miR-3201 | cagcctgATATCCac | GGGAUAUG | m6b | Created | HPSEF_2325_G2770.1_212911966 |
hsa-miR-4438 | cAGCCTGTtatccac | CACAGGCU | m7b | Disrupted | HPSEF_2325_G2770.1_212911966 |