SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database

Prediction criteria: TargetScan sites only     All 6mer or longer seed matches

Transcript ID: NM_001042481
Gene Symbol: FRMD6

Somatic mutations that impact miRNA target sites



Mutation Mutation ID Sample Name Cancer Type
chr14:g.51728117A>G COSN5387352 RK085_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-942-3p gtGCCATGTcttctt CACAUGGC m7b (m6b->m7b) HPTK1_9486_G11228.1_52194825
hsa-miR-641 gtgccATGTCTTctt AAAGACAU m7b Created HPTK1_9486_G11228.1_52194825
hsa-miR-3617-5p gtgccATGTCTTctt AAAGACAU m7b Created HPTK1_9486_G11228.1_52194825
hsa-miR-183-5p GTGCCATAtcttctt UAUGGCAC m8a Disrupted HPTK1_9486_G11228.1_52194825

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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