SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001042412
Gene Symbol: CYLD
Browse Pathways

Somatic mutations that impact miRNA target sites

Mutation Mutation ID Sample Name Cancer Type
chr16:g.50777921A>AA COSM214342 1660225 [skin][NS][adnexal_tumour][trichoepithelioma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr16:g.50777916A>G COSM1378220 TCGA-DM-A28F-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-129-5p ccaaatCAAAAAata CUUUUUGC m6b Disrupted HPSEF_8766_G10507.1_50811835

Mutation Mutation ID Sample Name Cancer Type
chr16:g.50777915C>A COSM43402 1352694 [skin][NS][adnexal_tumour][cylindroma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-129-5p tccaaatCAAAAAat CUUUUUGC m6b Disrupted HPSEF_8766_G10507.1_50811835

Mutation Mutation ID Sample Name Cancer Type
chr16:g.50777914T>C COSM1563091 TCGA-AF-2693-01 [large_intestine][rectum][NS][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-659-3p atccaAACCAAaaaa CUUGGUUC m6b Created HPSEF_8766_G10507.1_50811835
hsa-miR-5087 atcCAAACCaaaaaa GGGUUUGU m6b Created HPSEF_8766_G10507.1_50811835
hsa-miR-29b-2-5p atccAAACCAaaaaa CUGGUUUC m6b Created HPSEF_8766_G10507.1_50811835

Mutation Mutation ID Sample Name Cancer Type
chr16:g.50777897C>G COSM1737934 2081350 [haematopoietic_and_lymphoid_tissue][NS][lymphoid_neoplasm][plasma_cell_myeloma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-223-3p gttgACTGACAacca UGUCAGUU m7a Created HPSEF_8766_G10507.1_50811835
hsa-miR-323b-5p gttgactGACAACCa AGGUUGUC m7b Created HPSEF_8766_G10507.1_50811835
hsa-miR-410-5p gttgactGACAACCa AGGUUGUC m7b Created HPSEF_8766_G10507.1_50811835
hsa-miR-4697-3p gttgACTGACAacca UGUCAGUG m7a Created HPSEF_8766_G10507.1_50811835
hsa-miR-494-5p gttgactGACAACCa AGGUUGUC m7b Created HPSEF_8766_G10507.1_50811835
hsa-miR-627-5p gttGACTCACaacca GUGAGUCU m7a Disrupted HPSEF_8766_G10507.1_50811835
hsa-miR-6755-3p gttgacTGACAACca UGUUGUCA m7b Created HPSEF_8766_G10507.1_50811835
hsa-miR-937-5p gtTGACTCACaacca GUGAGUCA m8a Disrupted HPSEF_8766_G10507.1_50811835

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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