SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001042412
Gene Symbol: CYLD
Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr16:g.50779732C>G COSM558064 TCGA-05-4424-01 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4481 caCCACTCCagcctc GGAGUGGG m7a (m7a->m6a) HPRO8_5609_G7375.1_50813634
hsa-miR-504-3p cacCACTCCagcctc GGGAGUGC m6b Disrupted HPRO8_5609_G7375.1_50813634
hsa-miR-4430 caccacTCCAGCCTc AGGCUGGA m8a Disrupted HPRO8_5609_G7375.1_50813634
hsa-miR-3652 caccacTCCAGCCtc CGGCUGGA m7b Disrupted HPRO8_5609_G7375.1_50813634
hsa-miR-6499-3p cacCACTGCagcctc AGCAGUGU m6b Created HPRO8_5609_G7375.1_50813634
hsa-miR-5693 caCCACTGCagcctc GCAGUGGC m7a (m6a->m7a) HPRO8_5609_G7375.1_50813634
hsa-miR-17-3p caccACTGCAGcctc ACUGCAGU m7b Created HPRO8_5609_G7375.1_50813634
hsa-miR-3135b caccaCTCCAGCCtc GGCUGGAG m8a Disrupted HPRO8_5609_G7375.1_50813634

Mutation Mutation ID Sample Name Cancer Type
chr16:g.50779722C>T COSM366210 LUAD-F00162 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3133 cGTTCTTTAccacca UAAAGAAC m8a (m7a->m8a) HPRO8_5609_G7375.1_50813634
hsa-miR-3185 cgTTCTTCaccacca AGAAGAAG m6b Disrupted HPRO8_5609_G7375.1_50813634
hsa-miR-4511 cGTTCTTCaccacca GAAGAACU m7a Disrupted HPRO8_5609_G7375.1_50813634

Mutation Mutation ID Sample Name Cancer Type
chr16:g.50779715C>T COSM218498 8030245 [pancreas][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-212-3p ctttGACTGTTcttc UAACAGUC m7b Created HPRO8_5609_G7375.1_50813634
hsa-miR-4773 ctttgaCTGTTCTtc CAGAACAG m7b Created HPRO8_5609_G7375.1_50813634
hsa-miR-132-3p ctttGACTGTTcttc UAACAGUC m7b Created HPRO8_5609_G7375.1_50813634

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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