SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions |
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Transcript ID: | NM_001042369 |
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Gene Symbol: | TROVE2 |
Browse Pathways |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
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chr1:g.193091634C>T | COSN6016272 | RK308_C01 | [liver][NS][carcinoma][NS] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-876-5p | tGAAATCCtttctct | UGGAUUUC | m7b | Disrupted | HPCB3_954_G1321.1_193060751 |
hsa-miR-3167 | tGAAATCCTttctct | AGGAUUUC | m8a | (m8a->m7a) | HPCB3_954_G1321.1_193060751 |
hsa-miR-541-5p | tgaAATCCTTTctct | AAAGGAUU | m8a | Disrupted | HPCB3_954_G1321.1_193060751 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr1:g.193089402T>C | COSN1423172 | RK058_C01 | [liver][NS][carcinoma][NS] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-6869-5p | aactTACTCACattt | GUGAGUAG | m7a | Disrupted | HPCB3_952_G1319.1_193058536 |
hsa-miR-8066 | aacttacTCACATTt | CAAUGUGA | m7b | Disrupted | HPCB3_952_G1319.1_193058536 |
hsa-miR-6759-5p | aacttACCCACAttt | UUGUGGGU | m7b | Created | HPCB3_952_G1319.1_193058536 |
hsa-miR-1229-5p | aactTACCCACattt | GUGGGUAG | m7a | Created | HPCB3_952_G1319.1_193058536 |
hsa-miR-299-3p | aacttaCCCACATtt | UAUGUGGG | m7b | Created | HPCB3_952_G1319.1_193058536 |
hsa-miR-1225-5p | aactTACCCACattt | GUGGGUAC | m7a | Created | HPCB3_952_G1319.1_193058536 |
hsa-miR-555 | aaCTTACCCacattt | AGGGUAAG | m7b | (m6b->m7b) | HPCB3_952_G1319.1_193058536 |