SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001040694
Gene Symbol: INCENP

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr11:g.62150088C>T COSM3383648 8051900 [pancreas][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-658 atgaCTCCGCaaggg GGCGGAGG m6b Disrupted HPTA1_2124_G2951.1_61917550
hsa-miR-2467-3p atgaCTCTGCaaggg AGCAGAGG m6b Created HPTA1_2124_G2951.1_61917550
hsa-miR-1273h-3p atgacTCTGCAaggg CUGCAGAC m6b Created HPTA1_2124_G2951.1_61917550
hsa-miR-759 atgACTCTGCaaggg GCAGAGUG m7a Created HPTA1_2124_G2951.1_61917550
hsa-miR-6850-5p atgacTCCGCAaggg GUGCGGAA m6b Disrupted HPTA1_2124_G2951.1_61917550
hsa-miR-6841-3p atgactcTGCAAGGg ACCUUGCA m7b Created HPTA1_2124_G2951.1_61917550
hsa-miR-4754 atgacTCCGCAaggg AUGCGGAC m6b Disrupted HPTA1_2124_G2951.1_61917550
hsa-miR-759 atgACTCTGCaaggg GCAGAGUG m7a Created HPTA1_2124_G2951.1_61917550
hsa-miR-6850-5p atgacTCCGCAaggg GUGCGGAA m6b Disrupted HPTA1_2124_G2951.1_61917550
hsa-miR-6841-3p atgactcTGCAAGGg ACCUUGCA m7b Created HPTA1_2124_G2951.1_61917550
hsa-miR-658 atgaCTCCGCaaggg GGCGGAGG m6b Disrupted HPTA1_2124_G2951.1_61917550
hsa-miR-4754 atgacTCCGCAaggg AUGCGGAC m6b Disrupted HPTA1_2124_G2951.1_61917550
hsa-miR-3678-3p atgaCTCTGCAaggg CUGCAGAG m7b Created HPTA1_2124_G2951.1_61917550
hsa-miR-1273h-3p atgacTCTGCAaggg CUGCAGAC m6b Created HPTA1_2124_G2951.1_61917550
hsa-miR-2467-3p atgaCTCTGCaaggg AGCAGAGG m6b Created HPTA1_2124_G2951.1_61917550
hsa-miR-3678-3p atgaCTCTGCAaggg CUGCAGAG m7b Created HPTA1_2124_G2951.1_61917550

Mutation Mutation ID Sample Name Cancer Type
chr11:g.62150070C>G COSM1509257 TCGA-69-7980-01 [lung][right_upper_lobe][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-202-3p gcttgTACCTCatat AGAGGUAU m6b Disrupted HPTA1_2124_G2951.1_61917550
hsa-miR-187-5p gcTTGTAGCtcatat GGCUACAA m7b (m6b->m7b) HPTA1_2124_G2951.1_61917550
hsa-let-7d-5p gcttgTACCTCatat AGAGGUAG m6b Disrupted HPTA1_2124_G2951.1_61917550
hsa-miR-4458 gcttgTACCTCatat AGAGGUAG m6b Disrupted HPTA1_2124_G2951.1_61917550
hsa-miR-556-5p gcttgtAGCTCATat GAUGAGCU m7b Created HPTA1_2124_G2951.1_61917550

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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