SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions |
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Transcript ID: | NM_001040616 |
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Gene Symbol: | LINS |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
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chr15:g.100569323A>G | COSM3706473 | HCC82T | [liver][NS][carcinoma][NS] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-8087 | aagaaAAGTCTTttc | GAAGACUU | m7b | Created | HPSLB_2820_G3391.1_101109502 |
hsa-miR-7161-5p | aagaaaAGTCTTTtc | UAAAGACU | m7b | Created | HPSLB_2820_G3391.1_101109502 |
hsa-miR-627-3p | aAGAAAAGtcttttc | UCUUUUCU | m7b | Created | HPSLB_2820_G3391.1_101109502 |
hsa-miR-548u | aagaaaAGTCTTTtc | CAAAGACU | m7b | Created | HPSLB_2820_G3391.1_101109502 |
hsa-miR-5003-3p | aaGAAAAGTcttttc | UACUUUUC | m7b | (m6b->m7b) | HPSLB_2820_G3391.1_101109502 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr15:g.100569321C>T | COSM3499700 | TCGA-DA-A1I5-06 | [skin][NS][malignant_melanoma][NS] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-6124 | gaaaaatCTTTTCCc | GGGAAAAG | m7b | Disrupted | HPSLB_2820_G3391.1_101109502 |
hsa-miR-3148 | gaaaaatTTTTTCCc | UGGAAAAA | m7b | Created | HPSLB_2820_G3391.1_101109502 |
hsa-miR-4282 | gaaAAATTTTttccc | UAAAAUUU | m7b | Created | HPSLB_2820_G3391.1_101109502 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr15:g.100569316C>T | COSM3499699 | TCGA-EE-A29S-06 | [skin][NS][malignant_melanoma][NS] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-8076 | atcttttTCCATATa | UAUAUGGA | m7b | Created | HPSLB_2820_G3391.1_101109502 |
hsa-miR-6871-5p | atctttTCCCATata | CAUGGGAG | m6b | Disrupted | HPSLB_2820_G3391.1_101109502 |
hsa-miR-6124 | atCTTTTCCCatata | GGGAAAAG | m8a | Disrupted | HPSLB_2820_G3391.1_101109502 |
hsa-miR-3115 | atcttttCCCATATa | AUAUGGGU | m7a | Disrupted | HPSLB_2820_G3391.1_101109502 |
hsa-miR-3148 | atcTTTTTCCAtata | UGGAAAAA | m8a | Created | HPSLB_2820_G3391.1_101109502 |
hsa-miR-3153 | atctTTTCCCatata | GGGGAAAG | m6b | Disrupted | HPSLB_2820_G3391.1_101109502 |
hsa-miR-3688-3p | atcttTTTCCATAta | UAUGGAAA | m8a | Created | HPSLB_2820_G3391.1_101109502 |
hsa-miR-4668-5p | atcTTTTCCCatata | AGGGAAAA | m7b | Disrupted | HPSLB_2820_G3391.1_101109502 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr15:g.100569303A>G | COSM2200304 | Gp5D | [large_intestine][NS][carcinoma][adenocarcinoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-1207-3p | taatCCAGCTGcact | UCAGCUGG | m7b | Created | HPSLB_2820_G3391.1_101109502 |
hsa-miR-3944-5p | taatccaGCTGCACt | UGUGCAGC | m7b | Created | HPSLB_2820_G3391.1_101109502 |
hsa-miR-378j | tAATCCAGctgcact | ACUGGAUU | m7b | Created | HPSLB_2820_G3391.1_101109502 |
hsa-miR-143-5p | taatccaACTGCACt | GGUGCAGU | m7b | Disrupted | HPSLB_2820_G3391.1_101109502 |
hsa-miR-1301-3p | taatccAGCTGCAct | UUGCAGCU | m7b | Created | HPSLB_2820_G3391.1_101109502 |
hsa-miR-1287-5p | taATCCAGCtgcact | UGCUGGAU | m7b | (m6b->m7b) | HPSLB_2820_G3391.1_101109502 |
hsa-miR-5047 | taatccAGCTGCAct | UUGCAGCU | m7b | Created | HPSLB_2820_G3391.1_101109502 |
hsa-miR-6839-5p | tAATCCAGctgcact | UCUGGAUU | m7b | Created | HPSLB_2820_G3391.1_101109502 |