| SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions |
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| Transcript ID: | NM_001040437 |
|---|---|
| Gene Symbol: | C6orf48 |
| Mutation | Mutation ID | Sample Name | Cancer Type | ||
|---|---|---|---|---|---|
| chr6:g.31839655G>A | COSM164507 | PD4937a | [breast][NS][carcinoma][HER-positive_carcinoma] | ||
| miRNA Targets Table | |||||
| miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
| hsa-miR-6715b-5p | aaTGCCTGaaaatta | ACAGGCAC | m6b | Disrupted | HHHSH_470_C6orf48|NM_001040438-1|exon_CDS|-6.08964518789198|0.139193119725729 |
| hsa-miR-30a-3p | aatgcCTGAAAatta | CUUUCAGU | m6b | Disrupted | HHHSH_470_C6orf48|NM_001040438-1|exon_CDS|-6.08964518789198|0.139193119725729 |
| hsa-miR-30d-3p | aatgcCTGAAAatta | CUUUCAGU | m6b | Disrupted | HHHSH_470_C6orf48|NM_001040438-1|exon_CDS|-6.08964518789198|0.139193119725729 |
| hsa-miR-30e-3p | aatgcCTGAAAatta | CUUUCAGU | m6b | Disrupted | HHHSH_470_C6orf48|NM_001040438-1|exon_CDS|-6.08964518789198|0.139193119725729 |
| hsa-miR-4742-5p | aaTGCCTGAaaatta | UCAGGCAA | m7a | (m7a->m6a) | HHHSH_470_C6orf48|NM_001040438-1|exon_CDS|-6.08964518789198|0.139193119725729 |
| hsa-miR-4692 | aaTGCCTGAaaatta | UCAGGCAG | m7a | (m7a->m6a) | HHHSH_470_C6orf48|NM_001040438-1|exon_CDS|-6.08964518789198|0.139193119725729 |
| Mutation | Mutation ID | Sample Name | Cancer Type | ||
|---|---|---|---|---|---|
| chr6:g.31839653C>T | COSM223072 | ME009T | [skin][trunk][malignant_melanoma][NS] | ||
| miRNA Targets Table | |||||
| miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
| hsa-miR-30e-3p | aaaatgcCTGAAAat | CUUUCAGU | m6b | Disrupted | HHHSH_470_C6orf48|NM_001040438-1|exon_CDS|-6.08964518789198|0.139193119725729 |
| hsa-miR-4269 | aaaaTGCCTGaaaat | GCAGGCAC | m6b | Disrupted | HHHSH_470_C6orf48|NM_001040438-1|exon_CDS|-6.08964518789198|0.139193119725729 |
| hsa-miR-4514 | aaaaTGCCTGaaaat | ACAGGCAG | m6b | Disrupted | HHHSH_470_C6orf48|NM_001040438-1|exon_CDS|-6.08964518789198|0.139193119725729 |
| hsa-miR-4692 | aaaaTGCCTGAaaat | UCAGGCAG | m7a | Disrupted | HHHSH_470_C6orf48|NM_001040438-1|exon_CDS|-6.08964518789198|0.139193119725729 |
| hsa-miR-4742-5p | aaaaTGCCTGAaaat | UCAGGCAA | m7a | Disrupted | HHHSH_470_C6orf48|NM_001040438-1|exon_CDS|-6.08964518789198|0.139193119725729 |
| hsa-miR-498 | aaaatGCTTGAAAat | UUUCAAGC | m8a | Created | HHHSH_470_C6orf48|NM_001040438-1|exon_CDS|-6.08964518789198|0.139193119725729 |
| hsa-miR-6715b-5p | aaaaTGCCTGaaaat | ACAGGCAC | m6b | Disrupted | HHHSH_470_C6orf48|NM_001040438-1|exon_CDS|-6.08964518789198|0.139193119725729 |
| hsa-miR-30d-3p | aaaatgcCTGAAAat | CUUUCAGU | m6b | Disrupted | HHHSH_470_C6orf48|NM_001040438-1|exon_CDS|-6.08964518789198|0.139193119725729 |
| hsa-miR-30a-3p | aaaatgcCTGAAAat | CUUUCAGU | m6b | Disrupted | HHHSH_470_C6orf48|NM_001040438-1|exon_CDS|-6.08964518789198|0.139193119725729 |
| Mutation | Mutation ID | Sample Name | Cancer Type | ||
|---|---|---|---|---|---|
| chr6:g.31839645A>G | COSM3347020 | TCGA-HJ-7597-01 | [stomach][NS][carcinoma][adenocarcinoma] | ||
| miRNA Targets Table | |||||
| miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
| hsa-miR-1250-3p | ttgggggGAAAATGc | ACAUUUUC | m7b | Created | HHHSH_470_C6orf48|NM_001040438-1|exon_CDS|-6.08964518789198|0.139193119725729 |
| hsa-miR-153-5p | ttgggggAAAAATGc | UCAUUUUU | m7b | Disrupted | HHHSH_470_C6orf48|NM_001040438-1|exon_CDS|-6.08964518789198|0.139193119725729 |
| hsa-miR-361-3p | tTGGGGGAaaaatgc | UCCCCCAG | m7a | Disrupted | HHHSH_470_C6orf48|NM_001040438-1|exon_CDS|-6.08964518789198|0.139193119725729 |
| hsa-miR-3679-3p | ttGGGGGAAaaatgc | CUUCCCCC | m7b | (m7b->m6b) | HHHSH_470_C6orf48|NM_001040438-1|exon_CDS|-6.08964518789198|0.139193119725729 |
| hsa-miR-4446-5p | ttggGGGAAAaatgc | AUUUCCCU | m6b | Disrupted | HHHSH_470_C6orf48|NM_001040438-1|exon_CDS|-6.08964518789198|0.139193119725729 |
| Mutation | Mutation ID | Sample Name | Cancer Type | ||
|---|---|---|---|---|---|
| chr6:g.31839644GA>G | COSM279446 | TCGA-AA-A010-01 | [large_intestine][colon][carcinoma][adenocarcinoma] | ||
| miRNA Targets Table | |||||
| miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
| hsa-miR-3679-3p | attGGGGGAAaaatgc | CUUCCCCC | m7b | Disrupted | HHHSH_470_C6orf48|NM_001040438-1|exon_CDS|-6.08964518789198|0.139193119725729 |
| hsa-miR-1250-3p | attggggGAAAATGc | ACAUUUUC | m7b | Created | HHHSH_470_C6orf48|NM_001040438-1|exon_CDS|-6.08964518789198|0.139193119725729 |
| hsa-miR-361-3p | atTGGGGGAaaaatgc | UCCCCCAG | m7a | (m7a->m6a) | HHHSH_470_C6orf48|NM_001040438-1|exon_CDS|-6.08964518789198|0.139193119725729 |
| hsa-miR-4446-5p | attggGGGAAAaatgc | AUUUCCCU | m6b | Disrupted | HHHSH_470_C6orf48|NM_001040438-1|exon_CDS|-6.08964518789198|0.139193119725729 |
| Mutation | Mutation ID | Sample Name | Cancer Type | ||
|---|---|---|---|---|---|
| chr6:g.31839643G>T | COSM3624808 | TCGA-D3-A2J8-06 | [skin][NS][malignant_melanoma][NS] | ||
| miRNA Targets Table | |||||
| miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
| hsa-miR-361-3p | tatTGGGGGAaaaat | UCCCCCAG | m7a | Disrupted | HHHSH_470_C6orf48|NM_001040438-1|exon_CDS|-6.08964518789198|0.139193119725729 |
| hsa-miR-3679-3p | tattGGGGGAAaaat | CUUCCCCC | m7b | Disrupted | HHHSH_470_C6orf48|NM_001040438-1|exon_CDS|-6.08964518789198|0.139193119725729 |
| hsa-miR-4446-5p | tattggGGGAAAaat | AUUUCCCU | m6b | Disrupted | HHHSH_470_C6orf48|NM_001040438-1|exon_CDS|-6.08964518789198|0.139193119725729 |
| hsa-miR-500b-3p | tatTGGGTGaaaaat | GCACCCAG | m6b | Created | HHHSH_470_C6orf48|NM_001040438-1|exon_CDS|-6.08964518789198|0.139193119725729 |
| hsa-miR-5096 | tattgGGTGAAAaat | GUUUCACC | m7b | Created | HHHSH_470_C6orf48|NM_001040438-1|exon_CDS|-6.08964518789198|0.139193119725729 |
| hsa-miR-6802-3p | tattGGGTGAAaaat | UUCACCCC | m7a | Created | HHHSH_470_C6orf48|NM_001040438-1|exon_CDS|-6.08964518789198|0.139193119725729 |