SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001040436
Gene Symbol: YARS2
Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr12:g.32753950TC>C COSM404913 LUAD-D02326 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-186-5p tatcaATTCTTTGtca CAAAGAAU m8a Disrupted HPTK1_7922_G9341.1_32906879

Mutation Mutation ID Sample Name Cancer Type
chr12:g.32753950C>A COSM4741813 T578 [large_intestine][caecum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-5692a atcaATTATTTGtca CAAAUAAU m8a Created HPTK1_7922_G9341.1_32906879
hsa-miR-186-5p atcaATTCTTTGtca CAAAGAAU m8a Disrupted HPTK1_7922_G9341.1_32906879

Mutation Mutation ID Sample Name Cancer Type
chr12:g.32753943A>G COSM938825 TCGA-B5-A0K9-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4423-5p ctttgtcAGGCAACc AGUUGCCU m7b Disrupted HPTK1_7922_G9341.1_32906879
hsa-miR-6514-3p ctttgtCAGGCAacc CUGCCUGU m6b Disrupted HPTK1_7922_G9341.1_32906879

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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