SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001040280
Gene Symbol: CD83

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr6:g.14131676A>G COSM279733 TCGA-AA-A010-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-297 ctcggggACATACAg AUGUAUGU m7b Disrupted HPSLB_6234_G7598.1_14131884
hsa-miR-4313 ctcGGGGGCatacag AGCCCCCU m6b Created HPSLB_6234_G7598.1_14131884
hsa-miR-4433b-5p ctcgGGGACATacag AUGUCCCA m7a Disrupted HPSLB_6234_G7598.1_14131884
hsa-miR-6834-3p ctcgGGGACATAcag UAUGUCCC m8a Disrupted HPSLB_6234_G7598.1_14131884
hsa-miR-675-3p ctcggggGCATACAg CUGUAUGC m7b Created HPSLB_6234_G7598.1_14131884
hsa-miR-567 ctcggggACATACag AGUAUGUU m6b Disrupted HPSLB_6234_G7598.1_14131884

Mutation Mutation ID Sample Name Cancer Type
chr6:g.14131662G>A COSM4670553 T3174 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-133a-5p acTACCAGCTgcaac AGCUGGUA m8a Disrupted HPSLB_6234_G7598.1_14131884
hsa-miR-1207-3p actaCCAGCTGcaac UCAGCUGG m7b Disrupted HPSLB_6234_G7598.1_14131884
hsa-miR-1301-3p actaccAGCTGCAAc UUGCAGCU m8a Disrupted HPSLB_6234_G7598.1_14131884
hsa-miR-4660 actaccAGCTGCAac UGCAGCUC m7a Disrupted HPSLB_6234_G7598.1_14131884
hsa-miR-5047 actaccAGCTGCAAc UUGCAGCU m8a Disrupted HPSLB_6234_G7598.1_14131884
hsa-miR-6516-5p actaccaACTGCAAc UUUGCAGU m7b Created HPSLB_6234_G7598.1_14131884
hsa-miR-7156-3p actaccaGCTGCAac CUGCAGCC m6b Disrupted HPSLB_6234_G7598.1_14131884

Mutation Mutation ID Sample Name Cancer Type
chr6:g.14131660C>T COSM450596 TCGA-BH-A18P-01 [breast][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1207-3p acactaCCAGCTGca UCAGCUGG m7b Disrupted HPSLB_6234_G7598.1_14131884
hsa-miR-1244 acACTACTagctgca AAGUAGUU m6b Created HPSLB_6234_G7598.1_14131884
hsa-miR-133a-5p acacTACCAGCTgca AGCUGGUA m8a Disrupted HPSLB_6234_G7598.1_14131884
hsa-miR-325 acaCTACTAGctgca CCUAGUAG m7b Created HPSLB_6234_G7598.1_14131884
hsa-miR-6073 aCACTACCagctgca GGUAGUGA m7a Disrupted HPSLB_6234_G7598.1_14131884

Mutation Mutation ID Sample Name Cancer Type
chr6:g.14131655A>C COSM3674566 TCGA-HC-8216-01 [prostate][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-142-3p ccgaaACACTACcag UGUAGUGU m7b Disrupted HPSLB_6234_G7598.1_14131884
hsa-miR-296-3p ccgaAACCCTaccag GAGGGUUG m6b Created HPSLB_6234_G7598.1_14131884
hsa-miR-4255 ccgaAACACTaccag CAGUGUUC m6b Disrupted HPSLB_6234_G7598.1_14131884
hsa-miR-5705 CCGAAACActaccag UGUUUCGG m8a Disrupted HPSLB_6234_G7598.1_14131884
hsa-miR-6073 ccgaaaCACTACCag GGUAGUGA m7a Disrupted HPSLB_6234_G7598.1_14131884

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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