SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001039613
Gene Symbol: IAH1

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr2:g.9488258CT>C COSM3722137 169 [upper_aerodigestive_tract][mouth][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-195-5p accttTGCTGCTtcct UAGCAGCA m7b Disrupted HPSEF_11846_G14206.1_9628384
hsa-miR-497-5p accttTGCTGCTtcct CAGCAGCA m7b Disrupted HPSEF_11846_G14206.1_9628384
hsa-miR-424-5p accttTGCTGCTtcct CAGCAGCA m7b Disrupted HPSEF_11846_G14206.1_9628384
hsa-miR-16-5p accttTGCTGCTtcct UAGCAGCA m7b Disrupted HPSEF_11846_G14206.1_9628384
hsa-miR-15b-5p accttTGCTGCTtcct UAGCAGCA m7b Disrupted HPSEF_11846_G14206.1_9628384
hsa-miR-15a-5p accttTGCTGCTtcct UAGCAGCA m7b Disrupted HPSEF_11846_G14206.1_9628384
hsa-miR-7706 acctttGCGCTTCct UGAAGCGC m7b Created HPSEF_11846_G14206.1_9628384
hsa-miR-6838-5p accttTGCTGCTTcct AAGCAGCA m8a Disrupted HPSEF_11846_G14206.1_9628384
hsa-miR-545-3p accTTTGCTGcttcct UCAGCAAA m7b Disrupted HPSEF_11846_G14206.1_9628384

Mutation Mutation ID Sample Name Cancer Type
chr2:g.9488242C>A COSM4096318 TCGA-CG-5723-01 [stomach][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-769-5p aaaAGGTCTCttctc UGAGACCU m7b Disrupted HPSEF_11846_G14206.1_9628384
hsa-miR-6759-3p aAAAGGTCtcttctc UGACCUUU m7b Disrupted HPSEF_11846_G14206.1_9628384
hsa-miR-5197-3p aaaaggtCTCTTCTc AAGAAGAG m7b Disrupted HPSEF_11846_G14206.1_9628384

Mutation Mutation ID Sample Name Cancer Type
chr2:g.9488198G>T COSM180387 TCGA-AA-3977-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3938 gGGGAATTaattttt AAUUCCCU m7a Created HPSEF_11845_G14205.1_9628322
hsa-miR-4760-3p ggggaATGAATTTtt AAAUUCAU m8a Disrupted HPSEF_11845_G14205.1_9628322
hsa-miR-664a-3p ggggAATGAATtttt UAUUCAUU m7b Disrupted HPSEF_11845_G14205.1_9628322

Mutation Mutation ID Sample Name Cancer Type
chr2:g.9488189AAGGG>A COSM311901 S00932 [lung][NS][carcinoma][small_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3127-3p gtctccaAAGGGGAatgaa UCCCCUUC m7a Disrupted HPSEF_11845_G14205.1_9628322
hsa-miR-432-5p gtCTCCAAGAatgaa UCUUGGAG m8a Created HPSEF_11845_G14205.1_9628322
hsa-miR-6756-3p gtctccaAAGGGGAatgaa UCCCCUUC m7a Disrupted HPSEF_11845_G14205.1_9628322

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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