SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001039550
Gene Symbol: DNAJB2

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr2:g.219279875G>A COSM4133479 PTC-10C [thyroid][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-521 gaAGTGCGTccgctg AACGCACU m7b (m7b->m6b) HHRBC_7792_BC3-2of3-SCL_7365
hsa-miR-521 gaAGTGCGTccgctg AACGCACU m7b (m7b->m6b) HHRBC_7792_BC3-2of3-SCL_7365
Mutation Mutation ID Sample Name Cancer Type
chr2:g.219279867C>G COSM719898 TCGA-21-1070-01 [lung][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr2:g.219279860C>T COSM442344 TCGA-E2-A15I-01 [breast][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-8078 tCCTAGACgtgccgc GGUCUAGG m7b Disrupted HHRBC_7792_BC3-2of3-SCL_7365

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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