SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001039477
Gene Symbol: THEMIS2

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr1:g.27882349A>C COSM288802 TCGA-AG-3894-01 [large_intestine][rectum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-5787 gctttCCAGCCaggc GGGCUGGG m6b Disrupted HPSEF_174_G206.1_28208848
hsa-miR-6504-5p gctttcCAGCCAGgc UCUGGCUG m7b Disrupted HPSEF_174_G206.1_28208848
hsa-miR-663a gctttCCCGCCaggc AGGCGGGG m6b Created HPSEF_174_G206.1_28208848
hsa-miR-6733-5p gCTTTCCCgccaggc UGGGAAAG m7b Created HPSEF_174_G206.1_28208848
hsa-miR-6739-5p gCTTTCCCgccaggc UGGGAAAG m7b Created HPSEF_174_G206.1_28208848
hsa-miR-6842-3p gctttCCAGCCAggc UUGGCUGG m7b Disrupted HPSEF_174_G206.1_28208848
hsa-miR-875-3p gcTTTCCAGccaggc CCUGGAAA m7b (m7b->m6b) HPSEF_174_G206.1_28208848
hsa-miR-1908-5p gctttCCCGCCaggc CGGCGGGG m6b Created HPSEF_174_G206.1_28208848
hsa-miR-3064-5p gctttcCAGCCAGgc UCUGGCUG m7b Disrupted HPSEF_174_G206.1_28208848
hsa-miR-3135b gcttTCCAGCCaggc GGCUGGAG m7a Disrupted HPSEF_174_G206.1_28208848
hsa-miR-3652 gcttTCCAGCCaggc CGGCUGGA m7b Disrupted HPSEF_174_G206.1_28208848
hsa-miR-3978 gCTTTCCAgccaggc GUGGAAAG m7b Disrupted HPSEF_174_G206.1_28208848
hsa-miR-4430 gcttTCCAGCCaggc AGGCUGGA m7b Disrupted HPSEF_174_G206.1_28208848
hsa-miR-4505 gctttCCAGCCaggc AGGCUGGG m6b Disrupted HPSEF_174_G206.1_28208848

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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