SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001038707
Gene Symbol: CDC42SE1

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr1:g.151053280G>A COSN8636176 J36_T [lung][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-7157-5p aagaAATGCTGcccc UCAGCAUU m7b Disrupted HPKMA_1410_G1628.1_151025763
hsa-miR-4310 aagaAATGCTGCccc GCAGCAUU m8a Disrupted HPKMA_1410_G1628.1_151025763
hsa-miR-103a-3p aagaaATGCTGCccc AGCAGCAU m7b Disrupted HPKMA_1410_G1628.1_151025763
hsa-miR-16-1-3p aagaAATACTGcccc CCAGUAUU m7b Created HPKMA_1410_G1628.1_151025763
hsa-miR-107 aagaaATGCTGCccc AGCAGCAU m7b Disrupted HPKMA_1410_G1628.1_151025763

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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