SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001038707
Gene Symbol: CDC42SE1

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr1:g.151052789G>A COSN8642145 AOCS-158-1-6 [ovary][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6085 gcttacAGCCCCTca AAGGGGCU m7b Disrupted HPCB3_1871_G2546.1_151025286
hsa-miR-4675 gcttACAGCCCCtca GGGGCUGU m8a Disrupted HPCB3_1871_G2546.1_151025286
hsa-miR-4741 gcttACAGCCCctca CGGGCUGU m7b Disrupted HPCB3_1871_G2546.1_151025286
hsa-miR-5194 gcttacaACCCCTCa UGAGGGGU m7b Created HPCB3_1871_G2546.1_151025286
hsa-miR-6738-5p gcttacaACCCCTCa CGAGGGGU m7b Created HPCB3_1871_G2546.1_151025286
hsa-miR-6813-5p gcttacAGCCCCTca CAGGGGCU m7b Disrupted HPCB3_1871_G2546.1_151025286
hsa-miR-185-3p gcttaCAGCCCCTca AGGGGCUG m8a Disrupted HPCB3_1871_G2546.1_151025286
hsa-miR-1914-3p gcttacaACCCCTCa GGAGGGGU m7b Created HPCB3_1871_G2546.1_151025286
hsa-miR-3184-5p gcttacaGCCCCTCa UGAGGGGC m7b Disrupted HPCB3_1871_G2546.1_151025286
hsa-miR-1537-5p gcTTACAGCccctca AGCUGUAA m7b (m7b->m6b) HPCB3_1871_G2546.1_151025286
hsa-miR-423-5p gcttacaGCCCCTCa UGAGGGGC m7b Disrupted HPCB3_1871_G2546.1_151025286

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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