SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001037806
Gene Symbol: NCKAP5L

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr12:g.49796594GC>C COSM1727553 181T [liver][NS][carcinoma][hepatocellular_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1207-5p cggCCTGCCAccccc UGGCAGGG m7a Created HPTK1_8086_G9528.1_50190358
hsa-miR-4435 cggcCTGGCCAccccc AUGGCCAG m7b Disrupted HPTK1_8086_G9528.1_50190358
hsa-miR-4651 cggcctgCCACCCCc CGGGGUGG m7b Created HPTK1_8086_G9528.1_50190358
hsa-miR-4755-3p cgGCCTGGCcaccccc AGCCAGGC m7b (m7b->m6b) HPTK1_8086_G9528.1_50190358
hsa-miR-608 cggcctgCCACCCCc AGGGGUGG m7b Created HPTK1_8086_G9528.1_50190358
hsa-miR-7150 cggCCTGCCAccccc CUGGCAGG m7b Created HPTK1_8086_G9528.1_50190358
hsa-miR-1207-5p cggCCTGCCAccccc UGGCAGGG m7a Created HPTK1_8086_G9528.1_50190358
hsa-miR-4435 cggcCTGGCCAccccc AUGGCCAG m7b Disrupted HPTK1_8086_G9528.1_50190358
hsa-miR-4651 cggcctgCCACCCCc CGGGGUGG m7b Created HPTK1_8086_G9528.1_50190358
hsa-miR-4755-3p cgGCCTGGCcaccccc AGCCAGGC m7b (m7b->m6b) HPTK1_8086_G9528.1_50190358
hsa-miR-608 cggcctgCCACCCCc AGGGGUGG m7b Created HPTK1_8086_G9528.1_50190358
hsa-miR-7150 cggCCTGCCAccccc CUGGCAGG m7b Created HPTK1_8086_G9528.1_50190358

Mutation Mutation ID Sample Name Cancer Type
chr12:g.49796589C>T COSM4781495 8068554 [pancreas][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3689d ggcCACCTCCattcc GGGAGGUG m7b Created HPTK1_8086_G9528.1_50190358
hsa-miR-4651 ggCCACCCCcattcc CGGGGUGG m7b (m7b->m6b) HPTK1_8086_G9528.1_50190358
hsa-miR-4802-5p ggccaCCTCCATtcc UAUGGAGG m7b Created HPTK1_8086_G9528.1_50190358
hsa-miR-608 ggCCACCCCcattcc AGGGGUGG m7b (m7b->m6b) HPTK1_8086_G9528.1_50190358
hsa-miR-6134 ggCCACCTCcattcc UGAGGUGG m7b (m6b->m7b) HPTK1_8086_G9528.1_50190358
hsa-miR-6751-5p ggccACCCCCAttcc UUGGGGGU m7b Disrupted HPTK1_8086_G9528.1_50190358
hsa-miR-6752-5p ggcCACCCCCattcc GGGGGGUG m7b Disrupted HPTK1_8086_G9528.1_50190358
hsa-miR-6803-5p ggccACCCCCAttcc CUGGGGGU m7b Disrupted HPTK1_8086_G9528.1_50190358
hsa-miR-6815-5p gGCCACCTccattcc UAGGUGGC m7b Created HPTK1_8086_G9528.1_50190358
hsa-miR-6835-5p ggccACCCCCattcc AGGGGGUA m6b Disrupted HPTK1_8086_G9528.1_50190358
hsa-miR-6842-5p ggcCACCCCCAttcc UGGGGGUG m8a Disrupted HPTK1_8086_G9528.1_50190358
hsa-miR-6851-5p ggcCACCTCCattcc AGGAGGUG m7b Created HPTK1_8086_G9528.1_50190358
hsa-miR-6865-5p gGCCACCTccattcc UAGGUGGC m7b Created HPTK1_8086_G9528.1_50190358
hsa-miR-7110-5p ggcCACCCCCAttcc UGGGGGUG m8a Disrupted HPTK1_8086_G9528.1_50190358
hsa-miR-3689d ggcCACCTCCattcc GGGAGGUG m7b Created HPTK1_8086_G9528.1_50190358
hsa-miR-4651 ggCCACCCCcattcc CGGGGUGG m7b (m7b->m6b) HPTK1_8086_G9528.1_50190358
hsa-miR-4802-5p ggccaCCTCCATtcc UAUGGAGG m7b Created HPTK1_8086_G9528.1_50190358
hsa-miR-608 ggCCACCCCcattcc AGGGGUGG m7b (m7b->m6b) HPTK1_8086_G9528.1_50190358
hsa-miR-6134 ggCCACCTCcattcc UGAGGUGG m7b (m6b->m7b) HPTK1_8086_G9528.1_50190358
hsa-miR-6751-5p ggccACCCCCAttcc UUGGGGGU m7b Disrupted HPTK1_8086_G9528.1_50190358
hsa-miR-6752-5p ggcCACCCCCattcc GGGGGGUG m7b Disrupted HPTK1_8086_G9528.1_50190358
hsa-miR-6803-5p ggccACCCCCAttcc CUGGGGGU m7b Disrupted HPTK1_8086_G9528.1_50190358
hsa-miR-6815-5p gGCCACCTccattcc UAGGUGGC m7b Created HPTK1_8086_G9528.1_50190358
hsa-miR-6835-5p ggccACCCCCattcc AGGGGGUA m6b Disrupted HPTK1_8086_G9528.1_50190358
hsa-miR-6842-5p ggcCACCCCCAttcc UGGGGGUG m8a Disrupted HPTK1_8086_G9528.1_50190358
hsa-miR-6851-5p ggcCACCTCCattcc AGGAGGUG m7b Created HPTK1_8086_G9528.1_50190358
hsa-miR-6865-5p gGCCACCTccattcc UAGGUGGC m7b Created HPTK1_8086_G9528.1_50190358
hsa-miR-7110-5p ggcCACCCCCAttcc UGGGGGUG m8a Disrupted HPTK1_8086_G9528.1_50190358

Mutation Mutation ID Sample Name Cancer Type
chr12:g.49796582C>G COSM1289779 CLL116 [haematopoietic_and_lymphoid_tissue][NS][lymphoid_neoplasm][chronic_lymphocytic_leukaemia-small_lymphocytic_lymphoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3915 cccaTTCCTCAtctc UUGAGGAA m7b Disrupted HPTK1_8086_G9528.1_50190358
hsa-miR-3928-3p cccaTTCCTCatctc GGAGGAAC m6b Disrupted HPTK1_8086_G9528.1_50190358
hsa-miR-3915 cccaTTCCTCAtctc UUGAGGAA m7b Disrupted HPTK1_8086_G9528.1_50190358
hsa-miR-3928-3p cccaTTCCTCatctc GGAGGAAC m6b Disrupted HPTK1_8086_G9528.1_50190358

Mutation Mutation ID Sample Name Cancer Type
chr12:g.49796580C>G COSM4963831 ITNET_0935_T [pancreas][NS][carcinoid-endocrine_tumour][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1273f cattcctCATCTCag GGAGAUGG m6b Disrupted HPTK1_8086_G9528.1_50190358
hsa-miR-143-3p cattccTCATCTCAg UGAGAUGA m8a Disrupted HPTK1_8086_G9528.1_50190358
hsa-miR-3915 caTTCCTCAtctcag UUGAGGAA m7b (m7b->m6b) HPTK1_8086_G9528.1_50190358
hsa-miR-3928-3p caTTCCTCatctcag GGAGGAAC m6b Disrupted HPTK1_8086_G9528.1_50190358
hsa-miR-4708-5p cattcctCATCTCag AGAGAUGC m6b Disrupted HPTK1_8086_G9528.1_50190358
hsa-miR-4770 cattccTCATCTCAg UGAGAUGA m8a Disrupted HPTK1_8086_G9528.1_50190358
hsa-miR-4772-5p cattCCTGATCtcag UGAUCAGG m7b Created HPTK1_8086_G9528.1_50190358
hsa-miR-6088 cattccTCATCTCag AGAGAUGA m7b Disrupted HPTK1_8086_G9528.1_50190358
hsa-miR-1273f cattcctCATCTCag GGAGAUGG m6b Disrupted HPTK1_8086_G9528.1_50190358
hsa-miR-143-3p cattccTCATCTCAg UGAGAUGA m8a Disrupted HPTK1_8086_G9528.1_50190358
hsa-miR-3915 caTTCCTCAtctcag UUGAGGAA m7b (m7b->m6b) HPTK1_8086_G9528.1_50190358
hsa-miR-3928-3p caTTCCTCatctcag GGAGGAAC m6b Disrupted HPTK1_8086_G9528.1_50190358
hsa-miR-4708-5p cattcctCATCTCag AGAGAUGC m6b Disrupted HPTK1_8086_G9528.1_50190358
hsa-miR-4770 cattccTCATCTCAg UGAGAUGA m8a Disrupted HPTK1_8086_G9528.1_50190358
hsa-miR-4772-5p cattCCTGATCtcag UGAUCAGG m7b Created HPTK1_8086_G9528.1_50190358
hsa-miR-6088 cattccTCATCTCag AGAGAUGA m7b Disrupted HPTK1_8086_G9528.1_50190358

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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