SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database

Prediction criteria: TargetScan sites only     All 6mer or longer seed matches

Transcript ID: NM_001037582
Gene Symbol: SCD5
Browse Pathways

Somatic mutations that impact miRNA target sites



Mutation Mutation ID Sample Name Cancer Type
chr4:g.82631506C>T COSM1694609 YUKLAB [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6828-5p agGCTTCCataatta AGGAAGCA m6b Disrupted HPTK1_22371_G26752.1_83552647
hsa-miR-671-5p aGGCTTCCataatta AGGAAGCC m7b Disrupted HPTK1_22371_G26752.1_83552647
hsa-miR-6079 agGCTTCCAtaatta UUGGAAGC m7b (m7b->m6b) HPTK1_22371_G26752.1_83552647
hsa-miR-3688-3p aggcTTCCATAatta UAUGGAAA m7a Disrupted HPTK1_22371_G26752.1_83552647

Mutation Mutation ID Sample Name Cancer Type
chr4:g.82631498C>T COSM4509980 CSCC-31-T [skin][head_neck][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-8069 ataattACCATCaca GGAUGGUU m6b Disrupted HPTK1_22371_G26752.1_83552647
hsa-miR-3682-3p ataatTATCATCAca UGAUGAUA m8a Created HPTK1_22371_G26752.1_83552647

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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