SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001037335
Gene Symbol: HELZ2

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr20:g.63564877C>A COSM4100434 TCGA-BR-4362-01 [stomach][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4445-5p aggccACAATCacca AGAUUGUU m6b Created HPSLB_4738_G5779.1_62196221
hsa-miR-8069 aggccACCATCacca GGAUGGUU m6b Disrupted HPSLB_4738_G5779.1_62196221
hsa-miR-7108-5p aGGCCACAatcacca GUGUGGCC m7b Created HPSLB_4738_G5779.1_62196221

Mutation Mutation ID Sample Name Cancer Type
chr20:g.63562802A>G COSM4642461 LIM2405 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-497-5p TGCTGCTGcctctgc CAGCAGCA m8a Created HPSLB_4737_G5778.1_62194162
hsa-miR-98-5p tgctgCTACCTCtgc UGAGGUAG m7b Disrupted HPSLB_4737_G5778.1_62194162
hsa-miR-15b-5p TGCTGCTAcctctgc UAGCAGCA m8a Disrupted HPSLB_4737_G5778.1_62194162
hsa-miR-195-5p TGCTGCTAcctctgc UAGCAGCA m8a Disrupted HPSLB_4737_G5778.1_62194162
hsa-miR-1827 tgctgCTGCCTCtgc UGAGGCAG m7b Created HPSLB_4737_G5778.1_62194162
hsa-miR-16-5p TGCTGCTAcctctgc UAGCAGCA m8a Disrupted HPSLB_4737_G5778.1_62194162
hsa-miR-15a-5p TGCTGCTAcctctgc UAGCAGCA m8a Disrupted HPSLB_4737_G5778.1_62194162
hsa-let-7i-5p tgctgCTACCTCtgc UGAGGUAG m7b Disrupted HPSLB_4737_G5778.1_62194162
hsa-let-7g-5p tgctgCTACCTCtgc UGAGGUAG m7b Disrupted HPSLB_4737_G5778.1_62194162
hsa-let-7f-5p tgctgCTACCTCtgc UGAGGUAG m7b Disrupted HPSLB_4737_G5778.1_62194162
hsa-let-7e-5p tgctgCTACCTCtgc UGAGGUAG m7b Disrupted HPSLB_4737_G5778.1_62194162
hsa-let-7d-5p tgctgCTACCTCTgc AGAGGUAG m8a Disrupted HPSLB_4737_G5778.1_62194162
hsa-let-7c-5p tgctgCTACCTCtgc UGAGGUAG m7b Disrupted HPSLB_4737_G5778.1_62194162
hsa-let-7b-5p tgctgCTACCTCtgc UGAGGUAG m7b Disrupted HPSLB_4737_G5778.1_62194162
hsa-miR-4500 tgctgCTACCTCtgc UGAGGUAG m7b Disrupted HPSLB_4737_G5778.1_62194162
hsa-miR-4458 tgctgCTACCTCTgc AGAGGUAG m8a Disrupted HPSLB_4737_G5778.1_62194162
hsa-let-7a-5p tgctgCTACCTCtgc UGAGGUAG m7b Disrupted HPSLB_4737_G5778.1_62194162
hsa-miR-4257 tgctgctACCTCTGc CCAGAGGU m7b Disrupted HPSLB_4737_G5778.1_62194162
hsa-miR-424-5p TGCTGCTGcctctgc CAGCAGCA m8a Created HPSLB_4737_G5778.1_62194162

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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