SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001035235
Gene Symbol: SRA1

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr5:g.140551094C>A COSM482048 TCGA-CW-6087-01 [kidney][NS][carcinoma][clear_cell_renal_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-5095 gtcaataCCTGTAAa UUACAGGC m7a Disrupted HHRBC_10538_BC3-2of3-SCL_11849
hsa-miR-552-3p gtcaatACCTGTaaa AACAGGUG m6b Disrupted HHRBC_10538_BC3-2of3-SCL_11849
hsa-miR-5681b gtCAATACCTgtaaa AGGUAUUG m8a Disrupted HHRBC_10538_BC3-2of3-SCL_11849
hsa-miR-582-5p gtcaatAACTGTAAa UUACAGUU m8a Created HHRBC_10538_BC3-2of3-SCL_11849
hsa-miR-7151-3p gtcaataCCTGTAaa CUACAGGC m6b Disrupted HHRBC_10538_BC3-2of3-SCL_11849
hsa-miR-4678 gtcAATACCTgtaaa AAGGUAUU m7b Disrupted HHRBC_10538_BC3-2of3-SCL_11849

Mutation Mutation ID Sample Name Cancer Type
chr5:g.140551089A>G COSM4135445 8051715 [pancreas][NS][carcinoid-endocrine_tumour][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6754-3p tacctGTGAAGAaga UCUUCACC m7a Created HHRBC_10538_BC3-2of3-SCL_11849
hsa-miR-6837-3p tacctGTGAAGaaga CCUUCACU m6b Created HHRBC_10538_BC3-2of3-SCL_11849
hsa-miR-7151-3p taCCTGTAaagaaga CUACAGGC m6b Disrupted HHRBC_10538_BC3-2of3-SCL_11849
hsa-miR-412-3p tacctGTGAAGaaga ACUUCACC m6b Created HHRBC_10538_BC3-2of3-SCL_11849
hsa-miR-4778-3p tacctgtGAAGAAGa UCUUCUUC m7b Created HHRBC_10538_BC3-2of3-SCL_11849
hsa-miR-5095 taCCTGTAAagaaga UUACAGGC m7a (m7a->m6a) HHRBC_10538_BC3-2of3-SCL_11849
hsa-miR-513a-5p taCCTGTGAAgaaga UUCACAGG m8a Created HHRBC_10538_BC3-2of3-SCL_11849

Mutation Mutation ID Sample Name Cancer Type
chr5:g.140551086G>T COSM1433630 TCGA-AZ-4315-01 [large_intestine][caecum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1236-3p ctgtaaaGAAGAGaa CCUCUUCC m6b Disrupted HHRBC_10538_BC3-2of3-SCL_11849
hsa-miR-4699-3p ctGTAAATaagagaa AAUUUACU m6b Created HHRBC_10538_BC3-2of3-SCL_11849
hsa-miR-6515-3p ctgtaaaGAAGAGAa UCUCUUCA m7a Disrupted HHRBC_10538_BC3-2of3-SCL_11849

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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