SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001033569
Gene Symbol: AMZ2

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr17:g.68250351C>T COSM344585 LUAD-S01315 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3688-3p ttgcatTTTCCATca UAUGGAAA m7b Created HPSEF_9700_G11659.1_66246485
hsa-miR-4434 ttgcaTTCTCCatca AGGAGAAG m6b Disrupted HPSEF_9700_G11659.1_66246485
hsa-miR-4516 ttgcaTTCTCCatca GGGAGAAG m6b Disrupted HPSEF_9700_G11659.1_66246485
hsa-miR-4531 ttgcaTTCTCCATca AUGGAGAA m8a Disrupted HPSEF_9700_G11659.1_66246485
hsa-miR-4534 ttgcattCTCCATCa GGAUGGAG m7b Disrupted HPSEF_9700_G11659.1_66246485
hsa-miR-5703 ttgcaTTCTCCatca AGGAGAAG m6b Disrupted HPSEF_9700_G11659.1_66246485
hsa-miR-6124 ttgcaTTTTCCatca GGGAAAAG m6b Created HPSEF_9700_G11659.1_66246485
hsa-miR-8082 ttgcattCTCCATCa UGAUGGAG m7b Disrupted HPSEF_9700_G11659.1_66246485
hsa-miR-3688-3p ttgcatTTTCCATca UAUGGAAA m7b Created HPSEF_9700_G11659.1_66246485
hsa-miR-4434 ttgcaTTCTCCatca AGGAGAAG m6b Disrupted HPSEF_9700_G11659.1_66246485
hsa-miR-4516 ttgcaTTCTCCatca GGGAGAAG m6b Disrupted HPSEF_9700_G11659.1_66246485
hsa-miR-4531 ttgcaTTCTCCATca AUGGAGAA m8a Disrupted HPSEF_9700_G11659.1_66246485
hsa-miR-4534 ttgcattCTCCATCa GGAUGGAG m7b Disrupted HPSEF_9700_G11659.1_66246485
hsa-miR-5703 ttgcaTTCTCCatca AGGAGAAG m6b Disrupted HPSEF_9700_G11659.1_66246485
hsa-miR-6124 ttgcaTTTTCCatca GGGAAAAG m6b Created HPSEF_9700_G11659.1_66246485
hsa-miR-8082 ttgcattCTCCATCa UGAUGGAG m7b Disrupted HPSEF_9700_G11659.1_66246485

Mutation Mutation ID Sample Name Cancer Type
chr17:g.68250334A>G COSM3748024 TCGA-06-5858-01 [central_nervous_system][brain][glioma][astrocytoma_Grade_IV]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-186-3p tCTTTGGGCccatta GCCCAAAG m8a (m7a->m8a) HPSEF_9700_G11659.1_66246485
hsa-miR-296-5p tctttGGGCCCatta AGGGCCCC m6b Created HPSEF_9700_G11659.1_66246485
hsa-miR-3136-3p tctTTGGGCCcatta UGGCCCAA m7b Created HPSEF_9700_G11659.1_66246485
hsa-miR-4506 tctttggACCCATTa AAAUGGGU m7b Disrupted HPSEF_9700_G11659.1_66246485
hsa-miR-6724-5p tctttGGGCCCAtta CUGGGCCC m7b Created HPSEF_9700_G11659.1_66246485
hsa-miR-6773-5p tctttGGGCCCAtta UUGGGCCC m7b Created HPSEF_9700_G11659.1_66246485
hsa-miR-7155-3p tctTTGGGCCcatta UGGCCCAA m7b Created HPSEF_9700_G11659.1_66246485
hsa-miR-186-3p tCTTTGGGCccatta GCCCAAAG m8a (m7a->m8a) HPSEF_9700_G11659.1_66246485
hsa-miR-296-5p tctttGGGCCCatta AGGGCCCC m6b Created HPSEF_9700_G11659.1_66246485
hsa-miR-3136-3p tctTTGGGCCcatta UGGCCCAA m7b Created HPSEF_9700_G11659.1_66246485
hsa-miR-4506 tctttggACCCATTa AAAUGGGU m7b Disrupted HPSEF_9700_G11659.1_66246485
hsa-miR-6724-5p tctttGGGCCCAtta CUGGGCCC m7b Created HPSEF_9700_G11659.1_66246485
hsa-miR-6773-5p tctttGGGCCCAtta UUGGGCCC m7b Created HPSEF_9700_G11659.1_66246485
hsa-miR-7155-3p tctTTGGGCCcatta UGGCCCAA m7b Created HPSEF_9700_G11659.1_66246485

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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