SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001031721
Gene Symbol: ZNF613

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr19:g.51944390T>A COSM3990215 TCGA-BQ-5877-01 [kidney][NS][carcinoma][papillary_renal_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-2116-5p ccaagcAAGAACaat GGUUCUUA m6b Created HPTA1_5841_G8234.1_52447637
hsa-miR-6853-3p ccaagcATGAACAat UGUUCAUU m7a Disrupted HPTA1_5841_G8234.1_52447637
hsa-miR-6739-3p ccaagcaAGAACAAt AUUGUUCU m7b Created HPTA1_5841_G8234.1_52447637
hsa-miR-4677-5p ccaagcAAGAACAAt UUGUUCUU m8a Created HPTA1_5841_G8234.1_52447637
hsa-miR-4273 ccaagcaAGAACAat GUGUUCUC m6b Created HPTA1_5841_G8234.1_52447637
hsa-miR-22-5p ccaagcAAGAACaat AGUUCUUC m6b Created HPTA1_5841_G8234.1_52447637
hsa-miR-1206 ccaagCATGAACAat UGUUCAUG m8a Disrupted HPTA1_5841_G8234.1_52447637

Mutation Mutation ID Sample Name Cancer Type
chr19:g.51944366G>A COSM2926549 HT115 [large_intestine][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-876-5p gagatggGAAATCCt UGGAUUUC m7b Disrupted HPTA1_5841_G8234.1_52447637
hsa-miR-587 gagATGGAAAatcct UUUCCAUA m7a Created HPTA1_5841_G8234.1_52447637
hsa-miR-3167 gagatggGAAATCCt AGGAUUUC m7b Disrupted HPTA1_5841_G8234.1_52447637
hsa-miR-1290 gagatggAAAATCCt UGGAUUUU m7b Created HPTA1_5841_G8234.1_52447637

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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