SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
  Home Search Help Download  

PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001031665
Gene Symbol: ZNF816

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr19:g.52950184C>T COSM3538234 TCGA-FS-A4FC-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4452 gaGAATTCAtactgg UUGAAUUC m7b (m7b->m6b) HPTA1_6280_G8786.1_53453434

Mutation Mutation ID Sample Name Cancer Type
chr19:g.52950178G>T COSM2928140 HCT116 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3679-3p tcatactGGGGAAaa CUUCCCCC m6b Disrupted HPTA1_6280_G8786.1_53453434
hsa-miR-2355-5p tcataCTGGGGAaaa AUCCCCAG m7b Disrupted HPTA1_6280_G8786.1_53453434
hsa-miR-6814-5p tcataCTTGGGAaaa UCCCAAGG m7a Created HPTA1_6280_G8786.1_53453434

Mutation Mutation ID Sample Name Cancer Type
chr19:g.52950169C>AC COSM2928139 Mel18 [skin][subungual][malignant_melanoma][acral_lentiginous]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-758-5p ggaaaAACCATacaa GAUGGUUG m6b Disrupted HPTA1_6280_G8786.1_53453434
hsa-miR-584-5p ggaaaAACCATAcaa UUAUGGUU m7b Disrupted HPTA1_6280_G8786.1_53453434
hsa-miR-218-2-3p ggaaaAACCATacaa CAUGGUUC m6b Disrupted HPTA1_6280_G8786.1_53453434

Mutation Mutation ID Sample Name Cancer Type
chr19:g.52950169C>A COSM4841239 TCGA-FU-A3HZ-01 [cervix][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-584-5p ggaaaAACCATAcaa UUAUGGUU m7b Disrupted HPTA1_6280_G8786.1_53453434
hsa-miR-567 ggaaaaAACATACaa AGUAUGUU m7b Created HPTA1_6280_G8786.1_53453434
hsa-miR-4307 ggaaAAAACATacaa AAUGUUUU m7b Created HPTA1_6280_G8786.1_53453434
hsa-miR-297 ggaaaaaACATACAa AUGUAUGU m7b Created HPTA1_6280_G8786.1_53453434
hsa-miR-218-2-3p ggaaaAACCATacaa CAUGGUUC m6b Disrupted HPTA1_6280_G8786.1_53453434
hsa-miR-758-5p ggaaaAACCATacaa GAUGGUUG m6b Disrupted HPTA1_6280_G8786.1_53453434

Mutation Mutation ID Sample Name Cancer Type
chr19:g.52950169AC>C COSM1396039 TCGA-AD-6889-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-218-2-3p gggaaaAACCATacaa CAUGGUUC m6b Disrupted HPTA1_6280_G8786.1_53453434
hsa-miR-584-5p gggaaaAACCATAcaa UUAUGGUU m7b Disrupted HPTA1_6280_G8786.1_53453434
hsa-miR-758-5p gggaaaAACCATacaa GAUGGUUG m6b Disrupted HPTA1_6280_G8786.1_53453434

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

Genome Browser