SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001029882
Gene Symbol: AHDC1

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr1:g.27549436A>C COSM3984950 TCGA-EV-5902-01 [kidney][NS][carcinoma][papillary_renal_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4674 ggGAGCCCAGgccag CUGGGCUC m8a Created HPSLC_1173_G1395.1_27875949
hsa-miR-4312 gggagcCAAGGCCag GGCCUUGU m7a Disrupted HPSLC_1173_G1395.1_27875949
hsa-miR-378g gggAGCCCAGgccag ACUGGGCU m7b Created HPSLC_1173_G1395.1_27875949
hsa-miR-939-3p gggaGCCCAGGccag CCCUGGGC m7b Created HPSLC_1173_G1395.1_27875949
hsa-miR-8057 ggGAGCCAaggccag GUGGCUCU m6b Disrupted HPSLC_1173_G1395.1_27875949
hsa-miR-6735-3p gggagccCAGGCCag AGGCCUGU m6b Created HPSLC_1173_G1395.1_27875949
hsa-miR-661 gggagCCCAGGCcag UGCCUGGG m7b Created HPSLC_1173_G1395.1_27875949
hsa-miR-212-5p gggaGCCAAGGccag ACCUUGGC m7b Disrupted HPSLC_1173_G1395.1_27875949

Mutation Mutation ID Sample Name Cancer Type
chr1:g.27549420C>T COSM4031135 TCGA-F1-6874-01 [stomach][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1255b-2-3p ccAGTGGTagtgggt AACCACUU m6b Created HPSLC_1173_G1395.1_27875949
hsa-miR-4301 ccagtggTAGTGGGt UCCCACUA m7b Created HPSLC_1173_G1395.1_27875949
hsa-miR-181a-2-3p cCAGTGGTagtgggt ACCACUGA m7a Created HPSLC_1173_G1395.1_27875949
hsa-miR-1273g-3p cCAGTGGTagtgggt ACCACUGC m7a Created HPSLC_1173_G1395.1_27875949
hsa-miR-4999-3p ccagtGGTAGTGggt UCACUACC m7b Created HPSLC_1173_G1395.1_27875949
hsa-miR-6890-3p ccagtGGCAGTGGgt CCACUGCC m8a Disrupted HPSLC_1173_G1395.1_27875949

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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