SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001029863
Gene Symbol: C6orf120

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr6:g.169703599C>CTT COSN15623483
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3167 tctAAATCCagctgc AGGAUUUC m6b Disrupted HPCB1_34806_G44597.1_170103688
hsa-miR-378j tctaAATCCAGctgc ACUGGAUU m7b Disrupted HPCB1_34806_G44597.1_170103688
hsa-miR-4699-5p tctaAATCTTCagctgc AGAAGAUU m7b Created HPCB1_34806_G44597.1_170103688
hsa-miR-6839-5p tctaAATCCAGctgc UCUGGAUU m7b Disrupted HPCB1_34806_G44597.1_170103688
hsa-miR-1287-5p tctaaATCCAGCtgc UGCUGGAU m7b Disrupted HPCB1_34806_G44597.1_170103688
hsa-miR-1207-3p tctaaatCCAGCTGc UCAGCUGG m7b Disrupted HPCB1_34806_G44597.1_170103688

Mutation Mutation ID Sample Name Cancer Type
chr6:g.169703475G>A COSN15623482
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4540 gagcctGGACTAAag UUAGUCCU m7a Disrupted HPCB1_34805_G44596.1_170103584
hsa-miR-5000-5p gagcCTGAACTaaag CAGUUCAG m7b Created HPCB1_34805_G44596.1_170103584
hsa-miR-6723-5p gagcctGGACTAaag AUAGUCCG m6b Disrupted HPCB1_34805_G44596.1_170103584

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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