SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions |
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Transcript ID: | NM_001025603 |
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Gene Symbol: | RFX5 |
Browse Pathways |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr1:g.151344274T>C | COSM2183444 | RKO | [large_intestine][NS][other][neoplasm] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-3908 | cagatATTGCTacag | GAGCAAUG | m6b | Disrupted | HHRBL_949_BCBL1-2of3-SCL_9291 |
hsa-miR-3942-5p | cagaTATTGCTacag | AAGCAAUA | m7b | Disrupted | HHRBL_949_BCBL1-2of3-SCL_9291 |
hsa-miR-4703-5p | cagaTATTGCTAcag | UAGCAAUA | m8a | Disrupted | HHRBL_949_BCBL1-2of3-SCL_9291 |
hsa-miR-4766-3p | cagatATTGCTAcag | AUAGCAAU | m7b | Disrupted | HHRBL_949_BCBL1-2of3-SCL_9291 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr1:g.151344268A>T | COSM3801825 | TCGA-A2-A3Y0-01 | [breast][NS][carcinoma][NS] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-1183 | ttgCTACAGTGgcat | CACUGUAG | m8a | Disrupted | HHRBL_949_BCBL1-2of3-SCL_9291 |
hsa-miR-3064-3p | ttgctacTGTGGCAt | UUGCCACA | m7b | Created | HHRBL_949_BCBL1-2of3-SCL_9291 |
hsa-miR-3137 | ttGCTACAGtggcat | UCUGUAGC | m7b | (m7b->m6b) | HHRBL_949_BCBL1-2of3-SCL_9291 |
hsa-miR-4252 | ttgctaCAGTGGCat | GGCCACUG | m7b | Disrupted | HHRBL_949_BCBL1-2of3-SCL_9291 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr1:g.151344238A>G | COSM2183443 | COLO678 | [large_intestine][NS][carcinoma][adenocarcinoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-891a-3p | ggtgtctGTGCCACc | AGUGGCAC | m7b | Created | HHRBL_949_BCBL1-2of3-SCL_9291 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr1:g.151344230C>A | COSM1264064 | ESO-0129 | [oesophagus][lower_third][carcinoma][adenocarcinoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-1207-5p | tgccacCCCTGCCtg | UGGCAGGG | m7b | Disrupted | HHRBL_949_BCBL1-2of3-SCL_9291 |
hsa-miR-1909-3p | tgccaCCCCTGCctg | CGCAGGGG | m7b | Disrupted | HHRBL_949_BCBL1-2of3-SCL_9291 |
hsa-miR-2682-5p | tgccaccACTGCCTg | CAGGCAGU | m7b | Created | HHRBL_949_BCBL1-2of3-SCL_9291 |
hsa-miR-34a-5p | tgccacCACTGCCtg | UGGCAGUG | m7b | Created | HHRBL_949_BCBL1-2of3-SCL_9291 |
hsa-miR-34b-5p | tgccaccACTGCCTg | UAGGCAGU | m7b | Created | HHRBL_949_BCBL1-2of3-SCL_9291 |
hsa-miR-34c-5p | tgccacCACTGCCTg | AGGCAGUG | m8a | Created | HHRBL_949_BCBL1-2of3-SCL_9291 |
hsa-miR-449a | tgccacCACTGCCtg | UGGCAGUG | m7b | Created | HHRBL_949_BCBL1-2of3-SCL_9291 |
hsa-miR-449b-5p | tgccacCACTGCCTg | AGGCAGUG | m8a | Created | HHRBL_949_BCBL1-2of3-SCL_9291 |
hsa-miR-449c-5p | tgccaccACTGCCTg | UAGGCAGU | m7b | Created | HHRBL_949_BCBL1-2of3-SCL_9291 |
hsa-miR-4651 | tgCCACCCCtgcctg | CGGGGUGG | m7b | (m7b->m6b) | HHRBL_949_BCBL1-2of3-SCL_9291 |
hsa-miR-4763-3p | tgccacCCCTGCCTg | AGGCAGGG | m8a | Disrupted | HHRBL_949_BCBL1-2of3-SCL_9291 |
hsa-miR-608 | tgCCACCCCTgcctg | AGGGGUGG | m8a | Disrupted | HHRBL_949_BCBL1-2of3-SCL_9291 |
hsa-miR-6722-3p | tgccaCCCCTGCctg | UGCAGGGG | m7b | Disrupted | HHRBL_949_BCBL1-2of3-SCL_9291 |
hsa-miR-6782-5p | tgcCACCCCTgcctg | UAGGGGUG | m7b | Disrupted | HHRBL_949_BCBL1-2of3-SCL_9291 |
hsa-miR-6808-5p | tgccaccCCTGCCTg | CAGGCAGG | m7b | Disrupted | HHRBL_949_BCBL1-2of3-SCL_9291 |
hsa-miR-6893-5p | tgccaccCCTGCCTg | CAGGCAGG | m7b | Disrupted | HHRBL_949_BCBL1-2of3-SCL_9291 |
hsa-miR-940 | tgccaccCCTGCCTg | AAGGCAGG | m7b | Disrupted | HHRBL_949_BCBL1-2of3-SCL_9291 |