SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001024956
Gene Symbol: SC5D

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr11:g.121309574A>G COSN1127832 HX4T [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1279 ctcCAATATGAatgt UCAUAUUG m8a Disrupted HPKTB_2021_G2583.1_121180278
hsa-miR-130a-5p ctccAATGTGAAtgt UUCACAUU m8a Created HPKTB_2021_G2583.1_121180278
hsa-miR-23a-3p ctccAATGTGAatgt AUCACAUU m7b Created HPKTB_2021_G2583.1_121180278
hsa-miR-23b-3p ctccAATGTGAatgt AUCACAUU m7b Created HPKTB_2021_G2583.1_121180278
hsa-miR-23c ctccAATGTGAatgt AUCACAUU m7b Created HPKTB_2021_G2583.1_121180278
hsa-miR-5007-3p ctccaATATGAatgt AUCAUAUG m6b Disrupted HPKTB_2021_G2583.1_121180278

Mutation Mutation ID Sample Name Cancer Type
chr11:g.121307172T>G COSM1351990 TCGA-AZ-4315-01 [large_intestine][caecum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3688-3p tttatcTTTCCATta UAUGGAAA m7b Disrupted HPKTB_2017_G2579.1_121177894
hsa-miR-3978 tttatCTTTCCAtta GUGGAAAG m7b Disrupted HPKTB_2017_G2579.1_121177894
hsa-miR-4520-3p tttatCTGTCCAtta UUGGACAG m7b Created HPKTB_2017_G2579.1_121177894

Mutation Mutation ID Sample Name Cancer Type
chr11:g.121303424G>T COSM1507100 TCGA-50-5930-01 [lung][right_lower_lobe][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-300 accataCTTGTATcc UAUACAAG m7b Created HPKTB_2015_G2577.1_121174133
hsa-miR-381-3p accataCTTGTATcc UAUACAAG m7b Created HPKTB_2015_G2577.1_121174133

Mutation Mutation ID Sample Name Cancer Type
chr11:g.121303423C>T COSM4723798 T3182 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4643 caccatATGTGTatc GACACAUG m6b Created HPKTB_2015_G2577.1_121174133
hsa-miR-466 caccatATGTGTATc AUACACAU m8a Created HPKTB_2015_G2577.1_121174133
hsa-miR-4789-3p caccaTATGTGTatc CACACAUA m7b Created HPKTB_2015_G2577.1_121174133
hsa-miR-5580-3p cacCATATGTGtatc CACAUAUG m8a Created HPKTB_2015_G2577.1_121174133

Mutation Mutation ID Sample Name Cancer Type
chr11:g.121303411T>G COSM1351986 TCGA-F4-6856-01 [large_intestine][caecum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-30a-5p actattTGTTTACAc UGUAAACA m8a Created HPKTB_2015_G2577.1_121174133
hsa-miR-30b-5p actattTGTTTACAc UGUAAACA m8a Created HPKTB_2015_G2577.1_121174133
hsa-miR-30c-5p actattTGTTTACAc UGUAAACA m8a Created HPKTB_2015_G2577.1_121174133
hsa-miR-30d-5p actattTGTTTACAc UGUAAACA m8a Created HPKTB_2015_G2577.1_121174133
hsa-miR-30e-5p actattTGTTTACAc UGUAAACA m8a Created HPKTB_2015_G2577.1_121174133
hsa-miR-495-3p actaTTTGTTTacac AAACAAAC m7a Created HPKTB_2015_G2577.1_121174133
hsa-miR-7-1-3p actATTTGTTtacac CAACAAAU m7b Created HPKTB_2015_G2577.1_121174133
hsa-miR-7-2-3p actATTTGTTtacac CAACAAAU m7b Created HPKTB_2015_G2577.1_121174133
Mutation Mutation ID Sample Name Cancer Type
chr11:g.121303407AT>A COSM1973089 Gp5D [large_intestine][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr11:g.121303400G>C COSM541379 TCGA-91-6829-01 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4772-3p tGTTGCAGattacta CCUGCAAC m7b Disrupted HPKTB_2015_G2577.1_121174133
hsa-miR-8066 tgttgCACATTacta CAAUGUGA m6b Created HPKTB_2015_G2577.1_121174133

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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