SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001024855
Gene Symbol: ZNF197

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr3:g.44644151C>T COSM110524 43T [pancreas][NS][carcinoid-endocrine_tumour][vipoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1246 agaaAATCCATacca AAUGGAUU m7b Disrupted HPSLC_12852_G15211.1_44685635
hsa-miR-1290 agAAAATCCAtacca UGGAUUUU m8a Disrupted HPSLC_12852_G15211.1_44685635
hsa-miR-3167 agaAAATCCatacca AGGAUUUC m6b Disrupted HPSLC_12852_G15211.1_44685635

Mutation Mutation ID Sample Name Cancer Type
chr3:g.44644146A>G COSM3594246 TCGA-EE-A29D-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-7152-5p tcaACAGGAAAtcca UUUCCUGU m8a Created HPSLC_12852_G15211.1_44685635
hsa-miR-876-5p tcaacagGAAATCCa UGGAUUUC m7b Created HPSLC_12852_G15211.1_44685635
hsa-miR-1266-3p tcAACAGGaaatcca CCCUGUUC m6b Created HPSLC_12852_G15211.1_44685635
hsa-miR-1267 TCAACAGGaaatcca CCUGUUGA m8a Created HPSLC_12852_G15211.1_44685635
hsa-miR-1290 tcaacagAAAATCCa UGGAUUUU m7b Disrupted HPSLC_12852_G15211.1_44685635
hsa-miR-3074-5p tcaaCAGGAAatcca GUUCCUGC m6b Created HPSLC_12852_G15211.1_44685635
hsa-miR-3167 tcaacagGAAATCCa AGGAUUUC m7b Created HPSLC_12852_G15211.1_44685635
hsa-miR-4652-3p tcAACAGAAaatcca GUUCUGUU m7b (m7b->m6b) HPSLC_12852_G15211.1_44685635
hsa-miR-4743-3p tcaACAGAAAatcca UUUCUGUC m7a Disrupted HPSLC_12852_G15211.1_44685635

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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