SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions |
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Transcript ID: | NM_001024809 |
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Gene Symbol: | RARA |
Browse Pathways |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
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chr17:g.40356565C>T | COSN7166379 | 8044594 | [pancreas][NS][carcinoma][NS] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-8073 | cagcaaaTGCCAGGa | ACCUGGCA | m7b | Created | HPCB1_16862_G21222.1_38512814 |
hsa-miR-1256 | cagcaAATGCCagga | AGGCAUUG | m6b | Created | HPCB1_16862_G21222.1_38512814 |
hsa-miR-1282 | caGCAAACGccagga | UCGUUUGC | m7b | (m7b->m6b) | HPCB1_16862_G21222.1_38512814 |
hsa-miR-221-5p | cagcaaaTGCCAGGa | ACCUGGCA | m7b | Created | HPCB1_16862_G21222.1_38512814 |
hsa-miR-4720-5p | cagcaaATGCCAGGa | CCUGGCAU | m8a | Created | HPCB1_16862_G21222.1_38512814 |
hsa-miR-4799-3p | cagcaaATGCCAGga | ACUGGCAU | m7b | Created | HPCB1_16862_G21222.1_38512814 |
hsa-miR-5588-5p | cagcaaATGCCAGga | ACUGGCAU | m7b | Created | HPCB1_16862_G21222.1_38512814 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
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chr17:g.40356541C>G | COSN15618736 | ||||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-7855-5p | cccagCTCACCAcat | UUGGUGAG | m7b | Disrupted | HPCB1_16862_G21222.1_38512814 |
hsa-miR-3160-3p | ccCAGCTCaccacat | AGAGCUGA | m6b | Disrupted | HPCB1_16862_G21222.1_38512814 |
hsa-miR-4487 | cCCAGCTCaccacat | AGAGCUGG | m7b | Disrupted | HPCB1_16862_G21222.1_38512814 |
hsa-miR-4710 | cccagCTCACCacat | GGGUGAGG | m6b | Disrupted | HPCB1_16862_G21222.1_38512814 |
hsa-miR-4792 | cccaGCTCACCacat | CGGUGAGC | m7b | Disrupted | HPCB1_16862_G21222.1_38512814 |
hsa-miR-1207-3p | cCCAGCTGAccacat | UCAGCUGG | m8a | (m7a->m8a) | HPCB1_16862_G21222.1_38512814 |