SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001018104
Gene Symbol: FAHD1

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr16:g.1827748C>T COSM3817355 TCGA-LL-A5YL-01 [breast][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-8075 acatCATCAGCtatg UGCUGAUG m7b Disrupted HPCB3_8180_G11257.1_1877741
hsa-miR-1272 aCATCATCagctatg GAUGAUGA m7a Disrupted HPCB3_8180_G11257.1_1877741
hsa-miR-1322 aCATCATCagctatg GAUGAUGC m7a Disrupted HPCB3_8180_G11257.1_1877741
hsa-miR-4502 acaTCATCAGCtatg GCUGAUGA m8a Disrupted HPCB3_8180_G11257.1_1877741
hsa-miR-8075 acatCATCAGCtatg UGCUGAUG m7b Disrupted HPCB3_8180_G11257.1_1877741
hsa-miR-1322 aCATCATCagctatg GAUGAUGC m7a Disrupted HPCB3_8180_G11257.1_1877741
hsa-miR-4502 acaTCATCAGCtatg GCUGAUGA m8a Disrupted HPCB3_8180_G11257.1_1877741
hsa-miR-1272 aCATCATCagctatg GAUGAUGA m7a Disrupted HPCB3_8180_G11257.1_1877741

Mutation Mutation ID Sample Name Cancer Type
chr16:g.1827725AT>A COSM4335871 T3724 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-548c-3p ctccatGATTTTTtcc CAAAAAUC m7b Disrupted HPCB3_8180_G11257.1_1877741
hsa-miR-2681-3p ctCCATGATtttttcc UAUCAUGG m7b (m7b->m6b) HPCB3_8180_G11257.1_1877741
hsa-miR-548c-3p ctccatGATTTTTtcc CAAAAAUC m7b Disrupted HPCB3_8180_G11257.1_1877741
hsa-miR-2681-3p ctCCATGATtttttcc UAUCAUGG m7b (m7b->m6b) HPCB3_8180_G11257.1_1877741

Mutation Mutation ID Sample Name Cancer Type
chr16:g.1827724G>T COSM4682306 T578 [large_intestine][caecum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-5692a cctccATTATTTttt CAAAUAAU m7b Created HPCB3_8180_G11257.1_1877741
hsa-miR-548c-3p cctccatGATTTTTt CAAAAAUC m7b Disrupted HPCB3_8180_G11257.1_1877741
hsa-miR-2681-3p cctCCATGATttttt UAUCAUGG m7b Disrupted HPCB3_8180_G11257.1_1877741
hsa-miR-5692a cctccATTATTTttt CAAAUAAU m7b Created HPCB3_8180_G11257.1_1877741
hsa-miR-548c-3p cctccatGATTTTTt CAAAAAUC m7b Disrupted HPCB3_8180_G11257.1_1877741
hsa-miR-2681-3p cctCCATGATttttt UAUCAUGG m7b Disrupted HPCB3_8180_G11257.1_1877741

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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