SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001018074
Gene Symbol: NR3C1
Browse Pathways

Somatic mutations that impact miRNA target sites

Mutation Mutation ID Sample Name Cancer Type
chr5:g.143281955C>A COSM205447 TCGA-A6-2672-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr5:g.143281946AT>T COSM4773957 GC_351T-GC_351N [stomach][NS][carcinoma][diffuse_adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-29a-5p atcaccAATCAGatac ACUGAUUU m6b Disrupted HPSEF_18870_G22770.1_142661512
hsa-miR-3920 atcaccAATCAGatac ACUGAUUA m6b Disrupted HPSEF_18870_G22770.1_142661512
hsa-miR-509-3p atcACCAATCAgatac UGAUUGGU m8a Disrupted HPSEF_18870_G22770.1_142661512

Mutation Mutation ID Sample Name Cancer Type
chr5:g.143281892G>A COSM1567862 TCGA-EI-6507-01 [large_intestine][rectum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4704-3p atcaaaaGTGACTGc UCAGUCAC m7b Disrupted HPSEF_18869_G22769.1_142661457
hsa-miR-153-5p atcAAAAATGActgc UCAUUUUU m8a Created HPSEF_18869_G22769.1_142661457
hsa-miR-1250-3p atcaAAAATGactgc ACAUUUUC m6b Created HPSEF_18869_G22769.1_142661457

Mutation Mutation ID Sample Name Cancer Type
chr5:g.143281232A>G COSN2073896 RK004_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4513 ttaaTCAGTCatctg AGACUGAC m6b Created HPSEF_18864_G22764.1_142660818
hsa-miR-4439 ttaaTCAGTCAtctg GUGACUGA m7b Created HPSEF_18864_G22764.1_142660818
hsa-miR-3920 tTAATCAGTcatctg ACUGAUUA m8a (m7a->m8a) HPSEF_18864_G22764.1_142660818
hsa-miR-3136-5p ttaaTCAGTCAtctg CUGACUGA m7b Created HPSEF_18864_G22764.1_142660818
hsa-miR-6855-3p ttaaTCAGTCatctg AGACUGAC m6b Created HPSEF_18864_G22764.1_142660818

Mutation Mutation ID Sample Name Cancer Type
chr5:g.143279169T>C COSN5070042 HCC85 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-5092 gtttaatCGTGGATt AAUCCACG m7b Created HPSEF_18853_G22752.1_142658726
hsa-miR-5092 gtttaatCGTGGATt AAUCCACG m7b Created HPSEF_18853_G22752.1_142658726

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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