SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001018067
Gene Symbol: SERBP1

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr1:g.67413248C>G COSM1503370 TCGA-55-1592-01 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4459 ttctgCTCCTGatgt CCAGGAGG m6b Disrupted HHRBC_459_BC3-2of3-SCL_849
hsa-miR-4468 tTCTGCTCctgatgt AGAGCAGA m7b Disrupted HHRBC_459_BC3-2of3-SCL_849
hsa-miR-4433a-3p ttctgCTCCTGatgt ACAGGAGU m6b Disrupted HHRBC_459_BC3-2of3-SCL_849
hsa-miR-4291 ttctgCTGCTGAtgt UUCAGCAG m7b Created HHRBC_459_BC3-2of3-SCL_849
hsa-miR-424-5p ttcTGCTGCTGatgt CAGCAGCA m8a Created HHRBC_459_BC3-2of3-SCL_849
hsa-miR-922 tTCTGCTGCtgatgt GCAGCAGA m8a (m7a->m8a) HHRBC_459_BC3-2of3-SCL_849
hsa-miR-6838-5p ttcTGCTGCTgatgt AAGCAGCA m7b Created HHRBC_459_BC3-2of3-SCL_849
hsa-miR-3617-3p ttctgcTGCTGATGt CAUCAGCA m8a Created HHRBC_459_BC3-2of3-SCL_849
hsa-miR-6081 ttCTGCTCCTgatgt AGGAGCAG m8a Disrupted HHRBC_459_BC3-2of3-SCL_849
hsa-miR-497-5p ttcTGCTGCTGatgt CAGCAGCA m8a Created HHRBC_459_BC3-2of3-SCL_849
hsa-miR-4768-3p ttctgCTCCTGatgt CCAGGAGA m6b Disrupted HHRBC_459_BC3-2of3-SCL_849
hsa-miR-15a-5p ttcTGCTGCTgatgt UAGCAGCA m7b Created HHRBC_459_BC3-2of3-SCL_849
hsa-miR-15b-5p ttcTGCTGCTgatgt UAGCAGCA m7b Created HHRBC_459_BC3-2of3-SCL_849
hsa-miR-16-5p ttcTGCTGCTgatgt UAGCAGCA m7b Created HHRBC_459_BC3-2of3-SCL_849
hsa-miR-195-5p ttcTGCTGCTgatgt UAGCAGCA m7b Created HHRBC_459_BC3-2of3-SCL_849
hsa-miR-214-3p ttctgCTGCTGatgt ACAGCAGG m6b Created HHRBC_459_BC3-2of3-SCL_849

Mutation Mutation ID Sample Name Cancer Type
chr1:g.67413214T>C COSM3492042 TCGA-EE-A29E-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4487 CCAGCTCTggcttaa AGAGCUGG m8a Disrupted HHRBC_459_BC3-2of3-SCL_849
hsa-miR-1203 ccaGCTCCGGcttaa CCCGGAGC m7b Created HHRBC_459_BC3-2of3-SCL_849

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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