SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database

Prediction criteria: TargetScan sites only     All 6mer or longer seed matches

Transcript ID: NM_001017956
Gene Symbol: OS9

Somatic mutations that impact miRNA target sites



Mutation Mutation ID Sample Name Cancer Type
chr12:g.57694798T>A COSM4851107 TCGA-R2-A69V-01 [cervix][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4317 acagcGCAATGagtg ACAUUGCC m6b Created HHRBC_3207_BC3-2of3-SCL_9106

Mutation Mutation ID Sample Name Cancer Type
chr12:g.57694787A>G COSM4710346 T1154 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4325 tctAAGTGCAAacag UUGCACUU m8a Created HHRBC_3207_BC3-2of3-SCL_9106
hsa-miR-507 tctaaGTGCAAAcag UUUUGCAC m7b Created HHRBC_3207_BC3-2of3-SCL_9106
hsa-miR-557 tctaaGTGCAAACag GUUUGCAC m8a Created HHRBC_3207_BC3-2of3-SCL_9106
hsa-miR-7703 tctaAGTGCAAacag UUGCACUC m7a Created HHRBC_3207_BC3-2of3-SCL_9106

Mutation Mutation ID Sample Name Cancer Type
chr12:g.57694781C>T COSM1218907 587376 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6859-5p gtcTCCTCTaagtac GAGAGGAA m6b Disrupted HHRBC_3207_BC3-2of3-SCL_9106
hsa-miR-877-5p gtcTCCTCTAagtac GUAGAGGA m7b Disrupted HHRBC_3207_BC3-2of3-SCL_9106
hsa-miR-302a-5p gtctccTTTAAGTac ACUUAAAC m7a Created HHRBC_3207_BC3-2of3-SCL_9106
hsa-miR-3125 gtcTCCTCTAagtac UAGAGGAA m7a Disrupted HHRBC_3207_BC3-2of3-SCL_9106
hsa-miR-3150b-3p gTCTCCTCtaagtac UGAGGAGA m7b Disrupted HHRBC_3207_BC3-2of3-SCL_9106
hsa-miR-3173-3p gtCTCCTTTaagtac AAAGGAGG m7a (m6a->m7a) HHRBC_3207_BC3-2of3-SCL_9106
hsa-miR-374c-3p gtctcctCTAAGTac CACUUAGC m6b Disrupted HHRBC_3207_BC3-2of3-SCL_9106
hsa-miR-3916 gtcTCCTCTaagtac AAGAGGAA m6b Disrupted HHRBC_3207_BC3-2of3-SCL_9106
hsa-miR-4428 gTCTCCTTtaagtac CAAGGAGA m7b Created HHRBC_3207_BC3-2of3-SCL_9106
hsa-miR-4784 gTCTCCTCtaagtac UGAGGAGA m7b Disrupted HHRBC_3207_BC3-2of3-SCL_9106

Mutation Mutation ID Sample Name Cancer Type
chr12:g.57694279C>T COSM246296 PR-00-1165 [prostate][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3912-3p tgagATGCGTTAtgg UAACGCAU m8a Disrupted HHRBC_3206_BC3-2of3-SCL_2156

Mutation Mutation ID Sample Name Cancer Type
chr12:g.57694275G>A COSM1363401 TCGA-A6-5656-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1285-5p tgaGTGAGATgcgtt GAUCUCAC m7b Disrupted HHRBC_3206_BC3-2of3-SCL_2156

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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