SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001017420
Gene Symbol: ESCO2

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr8:g.27803407C>A COSM1205667 587342 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4701-3p aaCACCCATaatttc AUGGGUGA m7a (m6a->m7a) HPSEF_21812_G26365.1_27660921
hsa-miR-608 aaCACCCCTaatttc AGGGGUGG m7a (m7a->m6a) HPSEF_21812_G26365.1_27660921
hsa-miR-6747-5p aACACCCCTaatttc AGGGGUGU m8a (m8a->m7a) HPSEF_21812_G26365.1_27660921
hsa-miR-6782-5p aaCACCCCTAatttc UAGGGGUG m8a Disrupted HPSEF_21812_G26365.1_27660921
hsa-miR-6789-5p aacaCCCCTAatttc GUAGGGGC m6b Disrupted HPSEF_21812_G26365.1_27660921
hsa-miR-6824-5p aacaCCCCTAatttc GUAGGGGA m6b Disrupted HPSEF_21812_G26365.1_27660921
hsa-miR-1262 aaCACCCATaatttc AUGGGUGA m7a (m6a->m7a) HPSEF_21812_G26365.1_27660921
hsa-miR-3115 aacACCCATAatttc AUAUGGGU m7b Created HPSEF_21812_G26365.1_27660921
hsa-miR-342-5p aaCACCCCTaatttc AGGGGUGC m7a (m7a->m6a) HPSEF_21812_G26365.1_27660921
hsa-miR-4278 aacaCCCCTAatttc CUAGGGGG m6b Disrupted HPSEF_21812_G26365.1_27660921

Mutation Mutation ID Sample Name Cancer Type
chr8:g.27803390C>G COSM3899328 TCGA-CD-5802-01 [stomach][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-656-5p ttGCAACCaagtact AGGUUGCC m6b Disrupted HPSEF_21812_G26365.1_27660921

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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